Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC233968.1-201ENST00000611212 1300 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 LAP3P1-201ENST00000403648 294 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 AL603766.1-201ENST00000407763 664 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 OR51A6P-201ENST00000418680 1004 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 AC092809.1-201ENST00000441469 474 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 AL157884.3-201ENST00000448273 1184 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 RN7SL271P-201ENST00000487601 295 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 AL133372.1-201ENST00000493565 745 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 AC108941.1-201ENST00000502853 530 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 RNU1-95P-201ENST00000516357 160 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 SNORA67.7-201ENST00000516664 135 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 RNU1-128P-201ENST00000516704 160 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 AP000619.3-201ENST00000535634 1127 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 AC020914.4-201ENST00000597690 277 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 AC069200.1-201ENST00000609511 323 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 AC006946.3-201ENST00000609791 756 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 ATE1-AS1-202ENST00000636460 506 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 AC010300.1-201ENST00000600671 5134 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 AC012020.1-201ENST00000624541 1728 ntBASIC3.57□□□□□ -1.84
CCDC88CQ9P219 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 RNU1-18P-201ENST00000363062 164 ntBASIC3.57□□□□□ -1.84
CCDC88CQ9P219 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 SNORA57.3-201ENST00000411095 141 ntBASIC3.57□□□□□ -1.84
CCDC88CQ9P219 AC010740.1-201ENST00000417035 684 ntBASIC3.57□□□□□ -1.84
CCDC88CQ9P219 RPL23AP82-202ENST00000427528 469 ntBASIC3.57□□□□□ -1.84
CCDC88CQ9P219 AC096638.2-201ENST00000434965 711 ntBASIC3.57□□□□□ -1.84
CCDC88CQ9P219 VN1R25P-201ENST00000443385 738 ntBASIC3.57□□□□□ -1.84
CCDC88CQ9P219 VN1R40P-201ENST00000455196 941 ntBASIC3.57□□□□□ -1.84
CCDC88CQ9P219 CYCSP53-201ENST00000455540 265 ntBASIC3.57□□□□□ -1.84
CCDC88CQ9P219 CENPBD1P1-201ENST00000464061 469 ntBASIC3.57□□□□□ -1.84
CCDC88CQ9P219 ACTR3P3-201ENST00000480448 893 ntBASIC3.57□□□□□ -1.84
CCDC88CQ9P219 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 AP003400.2-201ENST00000624036 666 ntBASIC3.57□□□□□ -1.84
CCDC88CQ9P219 AC016542.2-201ENST00000624201 619 ntBASIC3.57□□□□□ -1.84
CCDC88CQ9P219 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC88CQ9P219 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 SNORA62.3-201ENST00000365110 153 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 HSPD1P16-201ENST00000402302 394 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AC245054.1-201ENST00000420944 258 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AL451062.2-201ENST00000427515 271 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 RPL7P28-201ENST00000437739 740 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AC074367.1-201ENST00000438685 1125 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 RNA5SP164-201ENST00000516533 110 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 MIR5187-201ENST00000583479 76 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AC020978.9-201ENST00000624380 1141 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AC119674.1-207ENST00000641355 633 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 OR6C71P-202ENST00000641886 1107 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AC024560.2-201ENST00000507981 1497 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 SNORA63.1-201ENST00000362493 131 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 MIR670-201ENST00000390142 98 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 RPL23AP83-201ENST00000434984 473 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AC084198.1-201ENST00000477747 402 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 BTF3L4P4-201ENST00000506381 449 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 SOD1P3-201ENST00000518682 454 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AC087369.1-201ENST00000520775 996 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 DEFB109D-201ENST00000529497 240 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms