Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RN7SKP254-201ENST00000410685 310 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 TPMTP2-201ENST00000414372 726 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 UQCRBP1-201ENST00000421129 336 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AL590135.1-201ENST00000422215 156 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 RPS17P8-201ENST00000434525 335 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AF228730.2-201ENST00000438784 848 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 SNORD127-201ENST00000458892 86 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 SNORA81.1-201ENST00000458922 177 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AC108161.1-201ENST00000461060 402 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 SLC25A51P1-201ENST00000468432 871 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 H3F3AP3-201ENST00000497682 407 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 RN7SKP24-201ENST00000515888 284 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 RNA5SP92-201ENST00000516437 110 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AC112191.2-201ENST00000522428 333 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 NCAPGP2-201ENST00000557911 754 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 RNF138P2-201ENST00000603490 592 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 RN7SL787P-201ENST00000613000 284 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AC243773.3-201ENST00000613270 256 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 MIR6128-201ENST00000615528 109 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 NCOA4P3-201ENST00000513203 1877 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AC005261.2-201ENST00000593427 4258 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AL589993.1-201ENST00000407450 2524 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 OFD1P17-201ENST00000437639 3018 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AL161912.4-201ENST00000623889 2468 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC110716.2-201ENST00000563865 3945 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 DLEU2L-201ENST00000371086 3555 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 RN7SKP95-201ENST00000362860 303 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 RNU6-169P-201ENST00000365336 107 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 Y_RNA.373-201ENST00000365600 103 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 U3.52-201ENST00000384034 216 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 BTBD10P2-201ENST00000404779 676 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 RNU4-34P-201ENST00000410431 124 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 RNU6-272P-201ENST00000411028 104 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AL450996.1-201ENST00000445574 1202 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC104651.2-201ENST00000447549 528 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 GLRXP3-201ENST00000470810 321 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 RPL23AP8-201ENST00000479812 475 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AL161747.1-201ENST00000480068 358 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 RNU4-29P-201ENST00000515943 174 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 IGKV3D-25-201ENST00000519599 235 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC022360.1-201ENST00000521058 340 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 COX6B1P6-201ENST00000522347 255 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 IGLVV-66-201ENST00000523818 341 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC022884.3-201ENST00000579571 248 ntBASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.43□□□□□ -1.38
CNTNAP3Q9BZ76 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms