Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RNU6-729P-201ENST00000384399 107 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 MIR7-3-201ENST00000384898 110 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AL590704.1-201ENST00000402856 794 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AL603766.1-201ENST00000407763 664 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 RAB9AP3-201ENST00000412737 573 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AC008280.1-201ENST00000418851 412 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 HIGD1AP4-201ENST00000430194 280 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 MTND2P25-201ENST00000449028 610 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 RAB9AP1-201ENST00000449393 573 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 ACTR3P3-201ENST00000480448 893 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AC087369.1-201ENST00000520775 996 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 SNORD39.2-201ENST00000579995 76 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AC090312.1-201ENST00000580637 348 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AC025946.2-201ENST00000603398 234 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AC078899.5-201ENST00000612475 178 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AF001550.2-201ENST00000636643 217 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 FAM35DP-201ENST00000323387 2712 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 HSPD1P16-201ENST00000402302 394 ntBASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 RAC1P3-201ENST00000416129 580 ntBASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 AC013470.3-201ENST00000420252 1194 ntBASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 AL356535.1-201ENST00000440335 398 ntBASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 VN1R25P-201ENST00000443385 738 ntBASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 RPS17P13-201ENST00000448974 407 ntBASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 VN1R40P-201ENST00000455196 941 ntBASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 AC026726.1-201ENST00000512859 601 ntBASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 AP000255.1-201ENST00000610276 676 ntBASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 AL645927.2-201ENST00000618350 349 ntBASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 AC124312.6-202ENST00000623624 418 ntBASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RPAP1Q9BWH6 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 AL450992.3-201ENST00000413192 568 ntBASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 AL357520.1-201ENST00000441557 453 ntBASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 RN7SL323P-201ENST00000494712 295 ntBASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 AC107016.1-201ENST00000550463 337 ntBASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 AC017100.2-201ENST00000584628 355 ntBASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 AC103858.2-201ENST00000621471 543 ntBASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 AC015908.5-201ENST00000623289 343 ntBASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RPAP1Q9BWH6 AC107021.2-201ENST00000567714 2095 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 RNU1-89P-201ENST00000384592 164 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 RPL7AP73-201ENST00000413490 353 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 UBE3AP2-201ENST00000429033 2259 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 AC087650.1-201ENST00000431445 468 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms