Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 DBIP1-201ENST00000401435 260 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 RPSAP44-201ENST00000406712 884 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 RN7SKP236-201ENST00000410635 284 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC011933.1-201ENST00000413334 321 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 RPLP0P7-201ENST00000416050 667 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC017078.1-201ENST00000416146 368 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 RBMY1KP-201ENST00000423480 476 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC016027.5-201ENST00000427227 210 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 CALM2P2-201ENST00000428512 440 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 RPL23AP69-201ENST00000431134 458 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 FUNDC2P2-202ENST00000443452 493 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC092421.1-201ENST00000448148 418 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC104073.1-201ENST00000451988 151 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC018475.1-201ENST00000478358 465 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC005017.1-201ENST00000482002 490 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC108860.1-201ENST00000484521 383 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC026979.1-201ENST00000492525 396 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC026801.1-201ENST00000497178 464 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 PGAM1P13-201ENST00000507497 754 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC108078.2-201ENST00000510750 236 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC117383.2-201ENST00000514722 322 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 Y_RNA.700-201ENST00000516806 100 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 RNU6-111P-201ENST00000517179 105 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 IGKV2D-23-201ENST00000518179 286 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC103855.4-201ENST00000533158 265 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC091304.5-201ENST00000568969 158 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC007136.1-201ENST00000589141 199 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 FTX_2.1-201ENST00000618816 94 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC069234.4-201ENST00000621276 412 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC091903.1-201ENST00000624322 454 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 MFSD8-227ENST00000641393 4069 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
USB1Q9BQ65 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USB1Q9BQ65 MAPK10-261ENST00000641050 3109 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC132219.2-201ENST00000624416 2327 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USB1Q9BQ65 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USB1Q9BQ65 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
USB1Q9BQ65 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 SNORA73B-201ENST00000363217 204 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 RNA5SP260-201ENST00000363849 111 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 Y_RNA.214-201ENST00000364201 112 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 Y_RNA.314-201ENST00000365114 102 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 RNU6-729P-201ENST00000384399 107 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 SNORD70.1-201ENST00000391007 85 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC096664.2-201ENST00000411843 406 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC123904.1-201ENST00000441072 368 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 CYCSP24-201ENST00000445119 316 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 RPL36AP55-201ENST00000454114 305 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC022447.4-201ENST00000504053 364 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC093664.1-201ENST00000511779 289 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 SCARNA20.1-201ENST00000516009 138 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 RNU6-798P-201ENST00000516912 103 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 SNORA81.3-201ENST00000517283 198 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms