Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 RNU6-1066P-201ENST00000363573 105 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 RNU6-185P-201ENST00000384421 107 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 RPL31P1-201ENST00000398116 372 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AC068533.2-201ENST00000411872 306 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 RPL26P29-201ENST00000415623 438 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 RPL21P111-201ENST00000418453 477 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AL356583.2-201ENST00000426536 280 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 USP24P1-201ENST00000433802 779 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 RPS4XP4-201ENST00000443195 763 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 RN7SL385P-201ENST00000468873 276 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AC108078.3-201ENST00000502633 489 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 PGAM1P13-201ENST00000507497 754 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 SNORA18.6-201ENST00000516792 115 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 RNU6-430P-201ENST00000517078 107 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 HMGB1P23-201ENST00000518743 568 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AC078899.1-201ENST00000521432 1185 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AL391840.1-201ENST00000571144 367 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AC008752.3-201ENST00000588113 712 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AC010487.1-201ENST00000594408 1172 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AC006115.2-201ENST00000596823 202 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AL118522.2-201ENST00000616045 615 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AL445264.1-201ENST00000621719 171 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AC093591.3-201ENST00000634516 308 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 ZNF402P-201ENST00000404435 3100 ntBASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SYNGAP1Q96PV0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC020656.2-201ENST00000613291 5309 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AL137141.1-201ENST00000624622 4836 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 RNU6-723P-201ENST00000383973 107 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 CALM2P3-201ENST00000400429 449 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 Y_RNA.598-201ENST00000410480 95 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 RNU6-248P-201ENST00000410720 107 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 RN7SKP213-201ENST00000410746 298 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 RPS27AP14-201ENST00000422868 454 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AL513174.1-201ENST00000423182 629 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 Z93242.1-201ENST00000427102 353 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 RPL21P110-201ENST00000433345 446 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 MRPS21P3-201ENST00000436696 262 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC006466.1-201ENST00000438721 289 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AL161722.1-201ENST00000446972 1032 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 USP9YP12-201ENST00000450481 570 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 BX248409.1-201ENST00000455497 255 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC128716.1-201ENST00000475129 166 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 RPL7AP6-201ENST00000477943 801 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 RPS4XP1-201ENST00000482189 787 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 RPL7P38-201ENST00000488396 739 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 SNX5P1-201ENST00000505757 1041 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC105914.1-201ENST00000511798 226 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AP000676.2-201ENST00000529711 301 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC138915.2-201ENST00000569776 97 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 KPNA2P3-201ENST00000584190 848 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC090525.3-201ENST00000605601 189 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 RNU6-88P-201ENST00000606801 100 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC103710.4-201ENST00000609301 899 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC6.39□□□□□ -1.39
SYNGAP1Q96PV0 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms