Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL21A1Q96P44 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL21A1Q96P44 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL21A1Q96P44 MIR1183-201ENST00000408856 89 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL21A1Q96P44 AC048351.1-201ENST00000420064 602 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 MRPL50P1-201ENST00000431951 384 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 RPL38P1-201ENST00000460914 211 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 RPL7P19-201ENST00000469948 618 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 AC103987.1-201ENST00000473394 348 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 AL161747.1-201ENST00000480068 358 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 MTND3P6-201ENST00000485242 339 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 HPRT1P2-201ENST00000505250 544 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 AC016550.3-201ENST00000515706 767 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 AC104997.1-201ENST00000519761 717 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 AC025884.1-201ENST00000556034 378 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 MRPS35P3-201ENST00000603189 709 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 PSMA6P4-201ENST00000603247 718 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL21A1Q96P44 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL21A1Q96P44 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL21A1Q96P44 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL21A1Q96P44 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL21A1Q96P44 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL21A1Q96P44 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 AC095050.2-201ENST00000510748 1458 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL21A1Q96P44 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL21A1Q96P44 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL21A1Q96P44 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 AC007342.9-201ENST00000623877 1385 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL21A1Q96P44 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 AL592437.2-201ENST00000421655 2434 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 AC011155.1-201ENST00000316512 456 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 AL121657.1-201ENST00000327215 531 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 SNORA60-201ENST00000362396 134 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL21A1Q96P44 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 RNU6-532P-201ENST00000384318 107 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 ENSAP1-201ENST00000392855 326 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 AL022722.2-201ENST00000402519 180 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 AMD1P2-201ENST00000412936 992 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 AL356806.1-201ENST00000422524 916 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 MTCO1P57-201ENST00000432182 261 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 AC096638.2-201ENST00000434965 711 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 AC090819.1-201ENST00000523800 1111 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 AC092851.1-201ENST00000535964 478 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 TRAV11-201ENST00000539512 339 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 RFPL1S-203ENST00000539579 330 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 AC068446.3-201ENST00000555285 382 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 GNRHR2P1-201ENST00000555315 631 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 RN7SL600P-201ENST00000581811 299 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 AC114878.2-201ENST00000604863 1251 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL21A1Q96P44 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL21A1Q96P44 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL21A1Q96P44 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL21A1Q96P44 MTCO1P8-201ENST00000416914 1523 ntBASIC3.79□□□□□ -1.8
COL21A1Q96P44 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.79□□□□□ -1.8
COL21A1Q96P44 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL21A1Q96P44 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL21A1Q96P44 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL21A1Q96P44 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL21A1Q96P44 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL21A1Q96P44 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL21A1Q96P44 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL21A1Q96P44 OR11H4-201ENST00000315409 1082 ntBASIC3.78□□□□□ -1.8
COL21A1Q96P44 RNU11-4P-201ENST00000391149 133 ntBASIC3.78□□□□□ -1.8
COL21A1Q96P44 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms