Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC090132.1-201ENST00000524071 1480 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
LRCH3Q96II8 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LRCH3Q96II8 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LRCH3Q96II8 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LRCH3Q96II8 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
LRCH3Q96II8 RNA5SP321-201ENST00000362722 111 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 RNU6-1151P-201ENST00000384684 107 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 AC092017.2-201ENST00000427600 362 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 PFN1P11-201ENST00000445829 389 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 AC092647.2-201ENST00000452998 253 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 SNX18P26-201ENST00000458433 740 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 AC103987.1-201ENST00000473394 348 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 NDUFB5P1-201ENST00000508134 564 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 RNU6-120P-201ENST00000516077 103 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 IGKV2D-23-201ENST00000518179 286 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 IGKV3D-25-201ENST00000519599 235 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 SNRPCP6-201ENST00000528310 210 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 EIF4A2P5-201ENST00000529914 499 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 HSPE1P20-201ENST00000538133 289 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 AC009779.6-201ENST00000603972 165 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 AL590032.1-201ENST00000604920 252 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 SNORD96A-201ENST00000606577 79 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 AC127459.3-201ENST00000624328 466 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 AL606534.2-204ENST00000635008 178 ntBASIC7.32□□□□□ -1.24
LRCH3Q96II8 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LRCH3Q96II8 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LRCH3Q96II8 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LRCH3Q96II8 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LRCH3Q96II8 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC7.32□□□□□ -1.24
LRCH3Q96II8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
LRCH3Q96II8 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LRCH3Q96II8 AP000766.1-201ENST00000561746 4140 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 RNU6-1029P-201ENST00000384109 107 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 Y_RNA.464-201ENST00000384282 110 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 PCNPP3-201ENST00000393579 471 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 AL078604.1-201ENST00000404609 466 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 GSTM3P2-201ENST00000412746 530 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 FTH1P10-202ENST00000430907 550 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 MTATP6P16-201ENST00000434543 526 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 AC019185.1-201ENST00000442718 389 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 AL353752.1-201ENST00000454946 260 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LRCH3Q96II8 AC004801.2-202ENST00000463559 283 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 AP002453.1-201ENST00000492327 668 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 AC116337.1-201ENST00000509680 687 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 Y_RNA.670-201ENST00000516255 105 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 AC092718.4-201ENST00000566639 716 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 MIR4703-201ENST00000577728 79 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 Z98751.3-201ENST00000604447 521 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 MTND4LP5-201ENST00000605152 292 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 SDR42E1P2-201ENST00000614861 481 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 U1.41-201ENST00000617626 165 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 SDR42E1P4-201ENST00000620894 481 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
LRCH3Q96II8 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LRCH3Q96II8 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LRCH3Q96II8 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 ZNF806-201ENST00000438300 1774 ntBASIC7.31□□□□□ -1.24
LRCH3Q96II8 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
LRCH3Q96II8 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
LRCH3Q96II8 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms