Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC024940.4-201ENST00000605507 246 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 NEAT1-202ENST00000501122 22743 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 AL133412.1-201ENST00000380194 2992 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 RAD17P1-201ENST00000418130 2042 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 MTCO1P6-201ENST00000481192 1384 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 MFSD8-216ENST00000641147 4009 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AC011978.2-201ENST00000569835 2054 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 RNA5SP52-201ENST00000362448 134 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 RN7SKP44-201ENST00000363602 316 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 RNU6-356P-201ENST00000384140 107 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 SNORA70E-201ENST00000384492 135 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AL355143.1-201ENST00000407101 841 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 SNORA11F-201ENST00000408237 128 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 RPS20P14-201ENST00000412545 360 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 RBMY1KP-201ENST00000423480 476 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 RPL21P110-201ENST00000433345 446 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 BX248409.1-201ENST00000455497 255 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 SNORD108-201ENST00000459332 71 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 CYCSP20-201ENST00000473154 315 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 TPT1P3-201ENST00000492841 512 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 ATP1B1P1-201ENST00000509767 915 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 MYL12AP1-201ENST00000518490 515 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AC051619.2-201ENST00000559063 397 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AC126365.2-201ENST00000580630 379 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 VN1R88P-201ENST00000596787 292 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AC120053.1-201ENST00000607706 736 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 KPNA2P2-201ENST00000419546 1489 ntBASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM5Q96HC4 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 AL132640.2-201ENST00000559968 1698 ntBASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 OR5P1P-201ENST00000299512 925 ntBASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 RN7SKP103-201ENST00000363848 320 ntBASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 MIR129-1-201ENST00000384972 72 ntBASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 RNA5SP239-201ENST00000410218 129 ntBASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 MIR1911-201ENST00000410783 80 ntBASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 RNU6-272P-201ENST00000411028 104 ntBASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 AL139128.1-201ENST00000413921 941 ntBASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 AL356387.2-201ENST00000422272 243 ntBASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 RPS12P5-201ENST00000423449 371 ntBASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 RPL23AP1-201ENST00000428990 471 ntBASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 AL512661.1-201ENST00000434586 1253 ntBASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 MOB1AP2-201ENST00000446060 614 ntBASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 RPL23AP15-201ENST00000450202 459 ntBASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM5Q96HC4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms