Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 TAS2R6P-201ENST00000605022 826 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC092653.1-201ENST00000608509 531 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC073114.1-201ENST00000612027 490 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC069209.1-201ENST00000619282 651 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC016717.3-201ENST00000624730 554 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 THAP12P4-201ENST00000528321 2266 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AL390237.1-201ENST00000404226 1415 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 PROS2P-201ENST00000474651 1951 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 RNU1-106P-201ENST00000384382 164 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 SNORD96B-201ENST00000386148 79 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AL031577.2-201ENST00000404133 280 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AL161449.1-201ENST00000414531 1199 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC244035.1-201ENST00000430042 390 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 RPS24P8-201ENST00000431490 402 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC093414.1-201ENST00000434712 514 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC092809.1-201ENST00000441469 474 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC104306.1-201ENST00000449702 371 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 RPL23AP56-201ENST00000460778 453 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 RN7SKP46-201ENST00000515942 234 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC092490.3-201ENST00000545370 572 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 FKBP1BP1-201ENST00000553366 325 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AL390838.2-201ENST00000602394 274 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AP000811.1-201ENST00000603803 651 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC010424.2-201ENST00000607594 443 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AC093799.2-201ENST00000610062 578 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AL607023.1-201ENST00000620045 248 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AP003072.4-201ENST00000624580 310 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AL445487.1-201ENST00000415694 1580 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 CR381670.1-201ENST00000624291 1693 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 AL359922.3-201ENST00000624779 1670 ntBASIC4.99□□□□□ -1.61
ATG4AQ8WYN0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 MTCO1P11-201ENST00000429111 1528 ntBASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 SNORA51.1-201ENST00000363243 140 ntBASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 RNU6-839P-201ENST00000363347 108 ntBASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 Y_RNA.194-201ENST00000363985 102 ntBASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 RNU6-621P-201ENST00000364752 109 ntBASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 Y_RNA.560-201ENST00000384689 102 ntBASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 MIR217-201ENST00000384817 110 ntBASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 GJA6P-201ENST00000415117 1042 ntBASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 P2RY10P2-201ENST00000416730 913 ntBASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 FABP7P1-201ENST00000424004 391 ntBASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 RPL7P4-203ENST00000430239 730 ntBASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.98□□□□□ -1.61
ATG4AQ8WYN0 PPIAP17-201ENST00000438507 471 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms