Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 JKAMPP1-201ENST00000413804 919 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 RPS3AP46-201ENST00000448352 682 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 NANOGP10-201ENST00000453325 895 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 AC006511.1-201ENST00000470614 315 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 RN7SL271P-201ENST00000487601 295 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 RNU1-95P-201ENST00000516357 160 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 RNU1-128P-201ENST00000516704 160 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 AL359715.5-201ENST00000623431 443 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 ATE1-AS1-202ENST00000636460 506 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 MFSD8-236ENST00000641509 4050 ntBASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 AC093535.2-201ENST00000624769 2326 ntBASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 AC018555.1-201ENST00000567548 1980 ntBASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 AL121834.1-202ENST00000404494 277 ntBASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 SNORA57.3-201ENST00000411095 141 ntBASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 TCEA1P4-201ENST00000415066 844 ntBASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 AL591623.2-201ENST00000449978 222 ntBASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 AL591363.1-201ENST00000450091 483 ntBASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 RN7SKP57-201ENST00000517248 293 ntBASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 OR7E13P-201ENST00000526052 910 ntBASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 AL031985.2-201ENST00000600955 480 ntBASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 AP003392.5-201ENST00000607857 415 ntBASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHROOM3Q8TF72 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 RNA5SP432-201ENST00000362480 116 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 MIR30B-201ENST00000384850 88 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 MIR34B-201ENST00000385076 84 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 MTND2P11-201ENST00000423638 648 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 ELOCP18-201ENST00000434209 337 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AL645931.1-201ENST00000439737 410 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 UBE2V2P4-201ENST00000447495 259 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AC008155.2-201ENST00000464337 397 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 HNRNPKP5-201ENST00000515300 253 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 DEFB109D-201ENST00000529497 240 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 OR4A12P-201ENST00000530847 918 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AP005205.1-201ENST00000563503 508 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AC244505.7-201ENST00000599675 272 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AC096638.2-201ENST00000434965 711 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AF228730.2-201ENST00000438784 848 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 UBDP1-202ENST00000457888 382 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 OR9M1P-201ENST00000459641 921 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 RN7SL293P-201ENST00000481765 281 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 OOSP1P2-201ENST00000579644 351 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 MIR6852-201ENST00000621699 66 ntBASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHROOM3Q8TF72 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 AC083899.2-201ENST00000423285 1376 ntBASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 AL603766.1-201ENST00000407763 664 ntBASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 AL390879.2-203ENST00000426943 1121 ntBASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 AC127537.2-201ENST00000439258 465 ntBASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 AC018635.1-201ENST00000468292 1030 ntBASIC3.86□□□□□ -1.79
SHROOM3Q8TF72 RPS29P2-201ENST00000479278 136 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms