Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 XKRYP3-201ENST00000442113 1116 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 GEMIN8P3-201ENST00000445417 720 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 UBDP1-202ENST00000457888 382 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 PPIAP15-201ENST00000479662 484 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 AC098862.1-201ENST00000504991 413 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 AC008628.1-201ENST00000508663 265 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 SCARNA1-201ENST00000517138 166 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 SNORA70.24-201ENST00000517233 118 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 AC010615.3-201ENST00000597319 394 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 AL031985.2-201ENST00000600955 480 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 AC067838.1-201ENST00000606064 577 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 AC015922.4-201ENST00000612568 690 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 AC104307.1-201ENST00000616142 196 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 MIR7702-201ENST00000621931 59 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 MIR3651-201ENST00000630427 90 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNED1Q8TER0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNED1Q8TER0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNED1Q8TER0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNED1Q8TER0 PRO1804-201ENST00000623780 2050 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 AL079305.1-201ENST00000623159 3008 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.78□□□□□ -1.64
SNED1Q8TER0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNED1Q8TER0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNED1Q8TER0 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.78□□□□□ -1.64
SNED1Q8TER0 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.78□□□□□ -1.64
SNED1Q8TER0 AP001273.1-201ENST00000624493 3152 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNED1Q8TER0 AC093849.1-201ENST00000563631 2209 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 MTND4P9-201ENST00000507819 1346 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SNED1Q8TER0 OR13C3-201ENST00000374781 1108 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 GCNT6-201ENST00000379591 934 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 SNORA3.3-201ENST00000408712 125 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 RPS29P4-201ENST00000414733 161 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNED1Q8TER0 AL590609.2-201ENST00000421430 368 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.78□□□□□ -1.64
SNED1Q8TER0 TMX2P1-201ENST00000436507 708 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 HSPD1P21-201ENST00000436541 245 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.78□□□□□ -1.64
SNED1Q8TER0 AC114878.1-201ENST00000441166 358 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 RNF2P1-201ENST00000442955 1010 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 TVP23BP2-201ENST00000455082 615 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 PSMC1P13-201ENST00000458195 985 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 SNORA59A-201ENST00000459326 152 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNED1Q8TER0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.78□□□□□ -1.64
SNED1Q8TER0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.78□□□□□ -1.64
SNED1Q8TER0 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNED1Q8TER0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.78□□□□□ -1.64
SNED1Q8TER0 AC122134.1-201ENST00000565664 1104 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 AC009303.3-201ENST00000591103 736 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 MIR7154-201ENST00000620673 73 ntBASIC4.78□□□□□ -1.64
SNED1Q8TER0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.78□□□□□ -1.64
SNED1Q8TER0 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.78□□□□□ -1.64
SNED1Q8TER0 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SNED1Q8TER0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNED1Q8TER0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNED1Q8TER0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNED1Q8TER0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNED1Q8TER0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNED1Q8TER0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNED1Q8TER0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNED1Q8TER0 RNU6-1263P-201ENST00000384601 106 ntBASIC4.77□□□□□ -1.65
SNED1Q8TER0 RSL24D1P1-201ENST00000404972 493 ntBASIC4.77□□□□□ -1.65
SNED1Q8TER0 HDGFP1-201ENST00000405943 252 ntBASIC4.77□□□□□ -1.65
SNED1Q8TER0 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 RPL23AP89-201ENST00000439324 255 ntBASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 AL353718.1-201ENST00000451028 517 ntBASIC4.77□□□□□ -1.65
SNED1Q8TER0 AL133244.1-201ENST00000456007 258 ntBASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 HSPD1P15-201ENST00000505573 1122 ntBASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNED1Q8TER0 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC079171.1-201ENST00000568788 914 ntBASIC4.77□□□□□ -1.65
SNED1Q8TER0 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC092354.2-201ENST00000607786 514 ntBASIC4.77□□□□□ -1.65
SNED1Q8TER0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms