Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.59□□□□□ -1.51
VPS8Q8N3P4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS8Q8N3P4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS8Q8N3P4 AC006077.1-201ENST00000604746 343 ntBASIC5.59□□□□□ -1.51
VPS8Q8N3P4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS8Q8N3P4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS8Q8N3P4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS8Q8N3P4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS8Q8N3P4 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
VPS8Q8N3P4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
VPS8Q8N3P4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS8Q8N3P4 RNU4-35P-201ENST00000362588 141 ntBASIC5.58□□□□□ -1.52
VPS8Q8N3P4 RNA5SP387-201ENST00000364226 106 ntBASIC5.58□□□□□ -1.52
VPS8Q8N3P4 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS8Q8N3P4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS8Q8N3P4 NPM1P39-201ENST00000449818 867 ntBASIC5.58□□□□□ -1.52
VPS8Q8N3P4 RN7SL293P-201ENST00000481765 281 ntBASIC5.58□□□□□ -1.52
VPS8Q8N3P4 HMGB3P14-201ENST00000494195 599 ntBASIC5.58□□□□□ -1.52
VPS8Q8N3P4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS8Q8N3P4 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.58□□□□□ -1.52
VPS8Q8N3P4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS8Q8N3P4 RN7SL339P-201ENST00000580597 296 ntBASIC5.58□□□□□ -1.52
VPS8Q8N3P4 AC010591.1-201ENST00000603941 649 ntBASIC5.58□□□□□ -1.52
VPS8Q8N3P4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS8Q8N3P4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS8Q8N3P4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VPS8Q8N3P4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VPS8Q8N3P4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS8Q8N3P4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS8Q8N3P4 AC083843.2-201ENST00000568248 6253 ntBASIC5.58□□□□□ -1.52
VPS8Q8N3P4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS8Q8N3P4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 SNORD17-201ENST00000390930 237 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 CYP4F29P-201ENST00000420685 446 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 RPS15AP29-201ENST00000445539 400 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AC110768.1-201ENST00000509222 400 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AP000619.3-201ENST00000535634 1127 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AC005476.1-201ENST00000554427 397 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 MIR4433B-201ENST00000581329 102 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AC006116.10-201ENST00000591836 581 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 U4.6-201ENST00000621618 127 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AC244258.1-201ENST00000637553 1071 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 RN7SKP111-201ENST00000410349 271 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AC074367.1-201ENST00000438685 1125 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 OR8I1P-201ENST00000529291 931 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 DEFB109D-201ENST00000529497 240 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 OR5AP1P-201ENST00000529730 940 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AL121766.1-201ENST00000547436 487 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AC092354.2-201ENST00000607786 514 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AC244100.1-202ENST00000621554 382 ntBASIC5.57□□□□□ -1.52
VPS8Q8N3P4 AC090337.1-201ENST00000579651 2074 ntBASIC5.56□□□□□ -1.52
VPS8Q8N3P4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS8Q8N3P4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VPS8Q8N3P4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS8Q8N3P4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS8Q8N3P4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS8Q8N3P4 CR381670.1-201ENST00000624291 1693 ntBASIC5.56□□□□□ -1.52
VPS8Q8N3P4 RPS26P47-201ENST00000427219 348 ntBASIC5.56□□□□□ -1.52
VPS8Q8N3P4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS8Q8N3P4 SKP1P1-201ENST00000438081 489 ntBASIC5.56□□□□□ -1.52
VPS8Q8N3P4 U3.44-201ENST00000458938 192 ntBASIC5.56□□□□□ -1.52
VPS8Q8N3P4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS8Q8N3P4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS8Q8N3P4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.56□□□□□ -1.52
VPS8Q8N3P4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS8Q8N3P4 AC067852.3-201ENST00000589177 561 ntBASIC5.56□□□□□ -1.52
VPS8Q8N3P4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS8Q8N3P4 AC015908.5-201ENST00000623289 343 ntBASIC5.56□□□□□ -1.52
VPS8Q8N3P4 AL359715.5-201ENST00000623431 443 ntBASIC5.56□□□□□ -1.52
VPS8Q8N3P4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS8Q8N3P4 AC083899.2-201ENST00000423285 1376 ntBASIC5.55□□□□□ -1.52
VPS8Q8N3P4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS8Q8N3P4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VPS8Q8N3P4 FRG1CP-201ENST00000358464 769 ntBASIC5.55□□□□□ -1.52
VPS8Q8N3P4 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS8Q8N3P4 AC073063.1-201ENST00000434352 607 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms