Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AL512646.1-201ENST00000269395 1077 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 OR4K15-201ENST00000305051 1216 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 RNU6-413P-201ENST00000384115 107 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 SNORA70F-201ENST00000384142 135 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AL591848.1-201ENST00000413092 322 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 OR51A3P-201ENST00000413596 924 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 MTND2P16-201ENST00000419987 799 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AC009480.2-201ENST00000422916 432 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 CENPIP1-201ENST00000425713 902 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 NPM1P24-201ENST00000428039 894 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 ARL2BPP10-201ENST00000446487 531 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 PTENP1-201ENST00000447117 1215 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 snoU13.1-201ENST00000459157 104 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 NDUFA5P9-201ENST00000472609 340 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AC015724.1-201ENST00000478577 156 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AC108043.1-201ENST00000512696 574 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 C1GALT1P3-201ENST00000522049 819 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AL442163.2-201ENST00000553912 710 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AC061975.8-201ENST00000587058 721 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AC123786.2-201ENST00000603459 275 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 MTND3P19-201ENST00000603825 345 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AC107952.2-201ENST00000606048 486 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 SNORD91B-202ENST00000608459 222 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 OR2L1P-202ENST00000641567 1023 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 DHX40P1-201ENST00000588725 1412 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AP000756.2-201ENST00000624168 2567 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AL355852.1-201ENST00000454081 1771 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 snoZ40.1-201ENST00000364540 72 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 ERHP2-201ENST00000402323 299 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC005005.2-201ENST00000420779 380 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC099336.2-201ENST00000422457 254 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC009965.2-201ENST00000425328 970 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 MTCO1P3-201ENST00000429327 192 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 MOB1AP1-201ENST00000430903 535 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC007327.1-201ENST00000447461 264 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC233982.1-201ENST00000451247 436 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC079168.2-201ENST00000453977 416 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC099560.2-201ENST00000457554 255 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AP000942.1-201ENST00000463969 747 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 OR52A4P-201ENST00000472867 958 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC090686.1-201ENST00000481577 749 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AK3P4-201ENST00000504283 583 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms