Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SNORA70.14-201ENST00000516205 110 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AL109741.3-201ENST00000561748 592 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 MRPS35P3-201ENST00000603189 709 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AL591034.3-201ENST00000605511 685 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 MIR6867-201ENST00000610636 67 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AC009318.3-201ENST00000616916 503 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 CFTRP2-201ENST00000634304 199 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AC110792.3-201ENST00000595906 1614 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 MAPK10-372ENST00000641954 3413 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AL139811.1-201ENST00000424779 2299 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.4□□□□□ -1.7
CCDC65Q8IXS2 IPO8P1-201ENST00000455509 3109 ntBASIC4.4□□□□□ -1.7
CCDC65Q8IXS2 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CCDC65Q8IXS2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 COX6CP17-201ENST00000421389 185 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AL691449.1-201ENST00000426570 421 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 RPL23AP4-201ENST00000427757 463 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AC083863.1-201ENST00000438811 231 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 XKRYP6-201ENST00000440468 1116 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 XKRYP3-201ENST00000442113 1116 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 TPT1P12-201ENST00000448968 492 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 ANP32BP2-201ENST00000454525 545 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 STRADBP1-201ENST00000478954 1281 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 RPS26P15-201ENST00000488067 348 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 USP9YP5-201ENST00000511770 630 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 OR4C2P-201ENST00000530855 1064 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AC009268.1-201ENST00000561352 1203 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AC020914.4-201ENST00000597690 277 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AC244505.7-201ENST00000599675 272 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AC034236.3-201ENST00000605999 461 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AP003392.5-201ENST00000607857 415 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AC083809.1-201ENST00000615051 472 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AL133370.2-201ENST00000619934 439 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 AC066616.2-201ENST00000559334 1481 ntBASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CCDC65Q8IXS2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 RLIMP1-201ENST00000339626 1680 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AP002001.2-201ENST00000529025 1469 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 RPL21P65-201ENST00000406094 466 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 RNU4-6P-201ENST00000410804 122 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AC093716.1-201ENST00000435923 377 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 USP9YP7-201ENST00000436723 430 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AC114755.5-201ENST00000447760 831 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 USP9YP32-201ENST00000452432 430 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AC110792.1-201ENST00000491826 472 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AC026726.1-201ENST00000512859 601 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 RNA5SP179-201ENST00000517284 121 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 IGKV2D-10-201ENST00000520194 281 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AL049844.2-201ENST00000604280 628 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AL590392.1-201ENST00000604960 446 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AC091167.4-201ENST00000605079 184 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 AC105105.5-201ENST00000622635 1294 ntBASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC65Q8IXS2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms