Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AP003385.6-201ENST00000531603 374 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AC079905.1-201ENST00000549280 475 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AC099489.2-201ENST00000574976 260 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 MIR4790-201ENST00000577799 79 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AC125232.2-201ENST00000592457 143 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AC018926.3-201ENST00000618841 406 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 MKKS-204ENST00000639674 192 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AL158163.1-201ENST00000603915 1649 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AC083806.2-201ENST00000617795 2685 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AC061975.7-201ENST00000592016 2692 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AL589993.1-201ENST00000407450 2524 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 Y_RNA.463-201ENST00000384271 102 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 Y_RNA.785-201ENST00000384290 109 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 RPL23AP32-201ENST00000395315 459 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 RN7SL705P-201ENST00000481678 294 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AC022206.1-201ENST00000495947 347 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AC011411.1-201ENST00000509592 876 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 KHDC1P1-201ENST00000511053 508 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 IGHV4-55-201ENST00000520889 368 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 MIR3167-201ENST00000579623 85 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 MIR3614-201ENST00000581261 86 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AC008521.2-201ENST00000591021 259 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AL670379.11-201ENST00000604059 253 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AL670379.10-201ENST00000604330 253 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AL670379.12-201ENST00000605291 253 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AL670379.9-201ENST00000605428 253 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AC007546.1-201ENST00000619452 559 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 TMEM75-201ENST00000624314 2165 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AL136984.1-201ENST00000607611 1893 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 AC010401.2-201ENST00000575137 4934 ntBASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NPAS3Q8IXF0 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms