Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AC010329.2-201ENST00000595195 2737 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SKA3Q8IX90 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 OR4K17-201ENST00000315543 1032 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 RNU6-792P-201ENST00000363490 107 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 RNU1-132P-201ENST00000364300 164 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 RNU6-650P-201ENST00000365658 111 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SKA3Q8IX90 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 RNA5SP36-201ENST00000410197 133 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 RN7SKP235-201ENST00000410662 305 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 P2RY10P2-201ENST00000416730 913 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 AL807761.1-201ENST00000417622 171 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 AL161631.1-201ENST00000417933 486 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 RBMY1KP-201ENST00000423480 476 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 EIF2S2P3-201ENST00000428356 999 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 AC069540.1-201ENST00000446320 988 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 RPL23AP81-201ENST00000455252 467 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 CYCSP53-201ENST00000455540 265 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 RN7SL303P-201ENST00000469773 251 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 S100A11P1-201ENST00000477525 312 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 RNA5SP49-201ENST00000516450 115 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 IGKV2D-10-201ENST00000520194 281 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 AC034205.1-201ENST00000520621 638 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 C1GALT1P3-201ENST00000522049 819 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 AC006064.5-201ENST00000541782 248 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 OR6R2P-201ENST00000609216 300 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 AL136295.6-201ENST00000610486 658 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 AL445363.3-201ENST00000623080 671 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 AP000843.1-201ENST00000624880 701 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.75□□□□□ -1.81
SKA3Q8IX90 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.75□□□□□ -1.81
SKA3Q8IX90 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SKA3Q8IX90 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SKA3Q8IX90 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SKA3Q8IX90 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SKA3Q8IX90 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SKA3Q8IX90 AC095050.2-201ENST00000510748 1458 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SKA3Q8IX90 MIR423-201ENST00000362201 94 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 RNU1-14P-201ENST00000362759 152 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SKA3Q8IX90 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SKA3Q8IX90 RNA5SP306-201ENST00000411087 107 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 FAR2P2-201ENST00000413041 594 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 LINC01881-201ENST00000416103 412 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 RPS23P10-201ENST00000416185 486 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SKA3Q8IX90 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 MTCO3P4-201ENST00000419236 787 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 AC115285.1-201ENST00000424879 736 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 FAR2P4-202ENST00000425399 584 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 RPL18P10-201ENST00000425606 538 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 FO393419.3-201ENST00000428741 282 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 AC073143.1-201ENST00000436316 395 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 RNFT1P2-201ENST00000443064 757 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 AC097499.1-201ENST00000444277 208 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 RNU6-1218P-201ENST00000458990 108 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 AC079804.1-201ENST00000461922 436 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SKA3Q8IX90 RN7SL481P-201ENST00000477764 299 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 RPL35P6-201ENST00000490024 372 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 AC104164.2-201ENST00000496953 495 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 AC108145.1-201ENST00000503770 153 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 RNA5SP73-201ENST00000516744 108 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 CIR1P1-201ENST00000524055 1133 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SKA3Q8IX90 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 AL136520.1-202ENST00000555494 763 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 PSMB7P1-201ENST00000556349 514 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms