Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RPS15AP30-201ENST00000420976 390 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 BEND7P1-201ENST00000422058 457 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 HMGN1P2-201ENST00000445197 310 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 BTF3P5-201ENST00000457252 467 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AC110749.1-201ENST00000462007 357 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 RPL12P30-201ENST00000488389 499 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AC114797.1-201ENST00000514003 728 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 RNU6-885P-201ENST00000516607 104 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 RN7SKP70-201ENST00000516655 271 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 RNU6-1271P-201ENST00000517049 105 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 DPPA3P3-201ENST00000603842 430 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AC092807.2-201ENST00000609367 243 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 RFPL4AP6-201ENST00000616792 846 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AC006378.2-201ENST00000623178 2476 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 ZNF101P1-201ENST00000435701 1720 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AC022325.1-201ENST00000502748 2199 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 Z83820.1-201ENST00000456978 1499 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AC012618.3-205ENST00000637896 1496 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 RNA5SP110-201ENST00000362638 115 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 RNU105B-201ENST00000364478 208 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 RNU6-619P-201ENST00000365146 108 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AC087752.1-201ENST00000391360 558 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 MIR1302-3-201ENST00000408128 138 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 RNA5SP156-201ENST00000410250 110 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 PMCHL1-202ENST00000423102 261 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 NANOGP6-201ENST00000429190 847 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 LSM1P1-201ENST00000438629 273 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AMYP1-201ENST00000440059 1023 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 CBX1P1-201ENST00000440184 427 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 RPL17P49-201ENST00000443728 411 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 RPL26P28-201ENST00000451325 435 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AL135752.1-201ENST00000479477 471 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AC010587.1-201ENST00000505809 469 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 MTCO2P24-201ENST00000515611 426 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 RNA5SP216-201ENST00000516111 123 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 RNU6-559P-201ENST00000516151 98 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 Y_RNA.718-201ENST00000517110 102 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 RNU6-1261P-201ENST00000517194 104 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 RN7SKP35-201ENST00000517210 151 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AP003181.2-201ENST00000528941 181 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AP002812.4-201ENST00000532139 286 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 TOMM20P1-201ENST00000534518 427 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AC026464.5-201ENST00000562497 722 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 MRPS21P8-201ENST00000569196 235 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG4DQ86TL0 MIR4701-201ENST00000583094 63 ntBASIC5.53□□□□□ -1.52
ATG4DQ86TL0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms