Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC010740.1-201ENST00000417035 684 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AL691447.1-201ENST00000419456 387 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC008065.1-201ENST00000428525 348 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC073522.1-201ENST00000483312 377 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC010486.1-201ENST00000511793 424 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 SMG1P4-204ENST00000523028 4131 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AL645937.1-201ENST00000641739 1652 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AL831737.1-201ENST00000441288 271 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC023141.12-201ENST00000512399 199 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC010342.1-201ENST00000514047 877 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC090877.1-201ENST00000561418 344 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 BNIP3P10-201ENST00000605360 577 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC007685.1-201ENST00000329806 452 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 RNU6-729P-201ENST00000384399 107 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC107083.1-201ENST00000439643 279 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 PTGES3P3-201ENST00000511479 482 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC010374.2-201ENST00000512933 535 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AC091905.1-201ENST00000624400 311 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 NAMPTP1-201ENST00000440465 2514 ntBASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13DQ5THJ4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 AC093698.1-201ENST00000423843 571 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 RPS15AP29-201ENST00000445539 400 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 RPS27AP1-201ENST00000475545 471 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 FTH1P24-201ENST00000503502 462 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 AL133457.1-201ENST00000564251 987 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 AL049840.6-202ENST00000603373 279 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 AC073657.2-201ENST00000605661 303 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 AC233263.6-201ENST00000631132 1963 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 OR5AW1P-201ENST00000426334 1006 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 MTCO1P46-201ENST00000451639 1491 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 SNORA44-201ENST00000384584 132 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 RNA5SP103-201ENST00000459503 118 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 AC010469.1-201ENST00000463864 576 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 NPM1P29-201ENST00000483112 803 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 UBA52P3-201ENST00000491303 382 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 MIR7154-201ENST00000620673 73 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 MIR8057-201ENST00000620957 69 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 MIR7702-201ENST00000621931 59 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 AL160175.1-201ENST00000428124 247 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 MOB1AP1-201ENST00000430903 535 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 AK5-208ENST00000478255 556 ntTSL 2 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms