Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRRK2Q5S007 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRRK2Q5S007 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRRK2Q5S007 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRRK2Q5S007 AC073335.1-201ENST00000427776 363 ntBASIC3.22□□□□□ -1.89
LRRK2Q5S007 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 RPL12P50-201ENST00000603116 116 ntBASIC3.22□□□□□ -1.89
LRRK2Q5S007 AL162274.2-201ENST00000614406 332 ntBASIC3.22□□□□□ -1.89
LRRK2Q5S007 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 AP003485.2-201ENST00000623636 610 ntBASIC3.22□□□□□ -1.89
LRRK2Q5S007 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
LRRK2Q5S007 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
LRRK2Q5S007 MIR422A-201ENST00000362286 90 ntBASIC3.21□□□□□ -1.9
LRRK2Q5S007 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
LRRK2Q5S007 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRK2Q5S007 RPL5P12-201ENST00000477071 851 ntBASIC3.21□□□□□ -1.9
LRRK2Q5S007 AC091544.4-201ENST00000555268 342 ntBASIC3.21□□□□□ -1.9
LRRK2Q5S007 AP003392.5-201ENST00000607857 415 ntBASIC3.21□□□□□ -1.9
LRRK2Q5S007 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRRK2Q5S007 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.21□□□□□ -1.9
LRRK2Q5S007 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRRK2Q5S007 AC024341.1-201ENST00000526444 1552 ntBASIC3.21□□□□□ -1.9
LRRK2Q5S007 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRK2Q5S007 MAPK10-303ENST00000641324 3959 ntBASIC3.21□□□□□ -1.9
LRRK2Q5S007 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.21□□□□□ -1.9
LRRK2Q5S007 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRRK2Q5S007 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.21□□□□□ -1.9
LRRK2Q5S007 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRRK2Q5S007 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRRK2Q5S007 NPM1P13-201ENST00000452663 865 ntBASIC3.21□□□□□ -1.9
LRRK2Q5S007 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRRK2Q5S007 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRK2Q5S007 UBE2NP1-201ENST00000545592 458 ntBASIC3.21□□□□□ -1.9
LRRK2Q5S007 CKS1BP3-201ENST00000600888 237 ntBASIC3.21□□□□□ -1.9
LRRK2Q5S007 COX6CP4-201ENST00000605798 228 ntBASIC3.21□□□□□ -1.9
LRRK2Q5S007 AC084036.1-201ENST00000609190 508 ntBASIC3.21□□□□□ -1.9
LRRK2Q5S007 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRK2Q5S007 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRK2Q5S007 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
LRRK2Q5S007 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRRK2Q5S007 ATP5F1P6-201ENST00000402768 767 ntBASIC3.2□□□□□ -1.9
LRRK2Q5S007 MRPS33P4-201ENST00000434892 317 ntBASIC3.2□□□□□ -1.9
LRRK2Q5S007 MTND6P32-201ENST00000457611 483 ntBASIC3.2□□□□□ -1.9
LRRK2Q5S007 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRK2Q5S007 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRK2Q5S007 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRK2Q5S007 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRK2Q5S007 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LRRK2Q5S007 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRK2Q5S007 RNU4-82P-201ENST00000362443 140 ntBASIC3.2□□□□□ -1.9
LRRK2Q5S007 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRK2Q5S007 GSTA8P-201ENST00000404253 637 ntBASIC3.2□□□□□ -1.9
LRRK2Q5S007 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRK2Q5S007 AC005002.1-201ENST00000447458 540 ntBASIC3.2□□□□□ -1.9
LRRK2Q5S007 RPS27AP15-201ENST00000447672 466 ntBASIC3.2□□□□□ -1.9
LRRK2Q5S007 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRK2Q5S007 PHBP14-201ENST00000512887 367 ntBASIC3.2□□□□□ -1.9
LRRK2Q5S007 RNA5SP116-201ENST00000516132 98 ntBASIC3.2□□□□□ -1.9
LRRK2Q5S007 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRK2Q5S007 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRK2Q5S007 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRK2Q5S007 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRK2Q5S007 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
LRRK2Q5S007 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRK2Q5S007 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRK2Q5S007 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRRK2Q5S007 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRK2Q5S007 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRK2Q5S007 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRK2Q5S007 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRRK2Q5S007 HSPA8P17-201ENST00000427029 1382 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 SNORA48.8-201ENST00000391324 134 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 NACAP7-201ENST00000407371 609 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 AC073522.1-201ENST00000483312 377 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 AC132942.1-201ENST00000486753 483 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 AC087369.1-201ENST00000520775 996 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 RPL21P7-201ENST00000557463 483 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRK2Q5S007 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRRK2Q5S007 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRK2Q5S007 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms