Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NDUFA5P2-201ENST00000519723 344 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 GTF2IP22-201ENST00000554443 182 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AC007599.1-201ENST00000568688 1174 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AC091167.4-201ENST00000605079 184 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 KATNBL1P1-201ENST00000605192 748 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AC026979.4-201ENST00000606555 645 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AC100814.1-201ENST00000606963 623 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 CFTRP2-201ENST00000634304 199 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AC119674.1-220ENST00000641502 1048 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
SHROOM1Q2M3G4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 RNU6-666P-201ENST00000363499 107 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 SNORA70.4-201ENST00000365509 134 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 RNU6ATAC-201ENST00000408749 126 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 UBTFL3-201ENST00000418934 1024 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 SKP1P3-201ENST00000429280 487 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AL035246.1-201ENST00000433554 1255 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 NOTCH2P1-201ENST00000443481 624 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 VN1R34P-201ENST00000447387 883 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AL133547.1-201ENST00000448546 220 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 snoU13.22-201ENST00000459428 104 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 UBTFL6-201ENST00000477929 1024 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 RN7SKP46-201ENST00000515942 234 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 BNIP3P22-201ENST00000593399 556 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AC024220.1-201ENST00000603675 484 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AL451086.1-201ENST00000605596 223 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AC097505.1-201ENST00000610199 565 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 LINC00216-201ENST00000623548 1126 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 AC090229.1-201ENST00000590983 1609 ntBASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.71□□□□□ -1.66
SHROOM1Q2M3G4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 RNU1-15P-201ENST00000353977 144 ntBASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 VDAC1P9-201ENST00000412766 841 ntBASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 RBMY1KP-201ENST00000423480 476 ntBASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 RPL23AP89-201ENST00000439324 255 ntBASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 ACTR3P3-201ENST00000480448 893 ntBASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 RN7SL323P-201ENST00000494712 295 ntBASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 AC079171.1-201ENST00000568788 914 ntBASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 AC087499.8-201ENST00000578406 226 ntBASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 CCDC58P3-201ENST00000590792 430 ntBASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 AC112230.1-201ENST00000604342 547 ntBASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 AL451044.1-201ENST00000604867 238 ntBASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 AL645927.2-201ENST00000618350 349 ntBASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 AC067852.7-201ENST00000623270 535 ntBASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHROOM1Q2M3G4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SHROOM1Q2M3G4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.69□□□□□ -1.66
SHROOM1Q2M3G4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHROOM1Q2M3G4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SHROOM1Q2M3G4 MAPK10-320ENST00000641462 6696 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms