Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MTCYBP12-201ENST00000440559 1134 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 XKRY2-201ENST00000442362 1093 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.63□□□□□ -1.67
GABPAQ06546 RAB9AP1-201ENST00000449393 573 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.63□□□□□ -1.67
GABPAQ06546 AC025554.1-201ENST00000505641 188 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.63□□□□□ -1.67
GABPAQ06546 IGKV2-38-201ENST00000517443 247 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 HIGD1AP18-201ENST00000520730 278 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.63□□□□□ -1.67
GABPAQ06546 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.63□□□□□ -1.67
GABPAQ06546 AC005242.1-201ENST00000585658 438 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.63□□□□□ -1.67
GABPAQ06546 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.63□□□□□ -1.67
GABPAQ06546 AC124312.6-202ENST00000623624 418 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 AC145207.9-201ENST00000623802 325 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 SPATA2P1-201ENST00000431223 2055 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
GABPAQ06546 AP002001.2-201ENST00000529025 1469 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GABPAQ06546 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GABPAQ06546 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GABPAQ06546 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
GABPAQ06546 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GABPAQ06546 SNORA73.2-201ENST00000364946 201 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 UBE2V1P15-201ENST00000407776 448 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 SNORA3.3-201ENST00000408712 125 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 RN7SKP156-201ENST00000410308 342 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.62□□□□□ -1.67
GABPAQ06546 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.62□□□□□ -1.67
GABPAQ06546 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.62□□□□□ -1.67
GABPAQ06546 MTND4P24-201ENST00000424002 397 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.62□□□□□ -1.67
GABPAQ06546 OR4F13P-201ENST00000428478 931 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 NPM1P34-201ENST00000428821 893 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 Z74696.2-201ENST00000436514 498 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.62□□□□□ -1.67
GABPAQ06546 CYCSP53-201ENST00000455540 265 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 PPIAP15-201ENST00000479662 484 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.62□□□□□ -1.67
GABPAQ06546 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.62□□□□□ -1.67
GABPAQ06546 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.62□□□□□ -1.67
GABPAQ06546 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GABPAQ06546 RNU6-1308P-201ENST00000516817 103 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 AC007991.1-201ENST00000522680 631 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.62□□□□□ -1.67
GABPAQ06546 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.62□□□□□ -1.67
GABPAQ06546 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.62□□□□□ -1.67
GABPAQ06546 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.62□□□□□ -1.67
GABPAQ06546 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.62□□□□□ -1.67
GABPAQ06546 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.62□□□□□ -1.67
GABPAQ06546 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.62□□□□□ -1.67
GABPAQ06546 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GABPAQ06546 AC242628.1-201ENST00000606810 391 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.62□□□□□ -1.67
GABPAQ06546 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GABPAQ06546 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GABPAQ06546 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GABPAQ06546 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GABPAQ06546 CR392039.5-201ENST00000623201 510 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.62□□□□□ -1.67
GABPAQ06546 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GABPAQ06546 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.62□□□□□ -1.67
GABPAQ06546 AF001550.2-201ENST00000636643 217 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.62□□□□□ -1.67
GABPAQ06546 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.62□□□□□ -1.67
GABPAQ06546 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GABPAQ06546 AC100871.1-201ENST00000507871 1456 ntBASIC4.62□□□□□ -1.67
GABPAQ06546 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
GABPAQ06546 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
GABPAQ06546 Z82217.1-201ENST00000625157 8149 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GABPAQ06546 HSPD1P11-201ENST00000508643 1702 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 OR4A15-201ENST00000314706 1035 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 SNORD51.1-201ENST00000365405 77 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
GABPAQ06546 MIR199A2-201ENST00000385289 110 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 PTMAP2-201ENST00000397627 327 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.61□□□□□ -1.67
GABPAQ06546 ZNF965P-201ENST00000432501 817 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 AP000936.3-201ENST00000438127 255 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.61□□□□□ -1.67
GABPAQ06546 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
GABPAQ06546 AC017037.1-201ENST00000508460 471 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 SETP12-201ENST00000514068 805 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 NPM1P35-201ENST00000533043 868 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.61□□□□□ -1.67
GABPAQ06546 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 AC023158.1-201ENST00000561632 1025 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 LINC00557-201ENST00000563184 1279 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GABPAQ06546 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.61□□□□□ -1.67
GABPAQ06546 AL096803.3-201ENST00000609032 532 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 AL773545.4-201ENST00000637262 310 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 AL513478.4-201ENST00000641636 310 ntBASIC4.61□□□□□ -1.67
GABPAQ06546 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.61□□□□□ -1.67
GABPAQ06546 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.61□□□□□ -1.67
GABPAQ06546 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
GABPAQ06546 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms