Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 PCNAP1-201ENST00000505363 709 ntBASIC3.79□□□□□ -1.8
HMGCS1Q01581 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 AC135001.1-201ENST00000544546 283 ntBASIC3.79□□□□□ -1.8
HMGCS1Q01581 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 BMS1P7-201ENST00000602440 1052 ntBASIC3.79□□□□□ -1.8
HMGCS1Q01581 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS1Q01581 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS1Q01581 AC104820.1-201ENST00000624183 307 ntBASIC3.79□□□□□ -1.8
HMGCS1Q01581 MIR492-201ENST00000638676 116 ntBASIC3.79□□□□□ -1.8
HMGCS1Q01581 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 AC119674.1-220ENST00000641502 1048 ntBASIC3.79□□□□□ -1.8
HMGCS1Q01581 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS1Q01581 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS1Q01581 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS1Q01581 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS1Q01581 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS1Q01581 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 RN7SKP44-201ENST00000363602 316 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 SNORD65-201ENST00000391079 73 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 ENSAP1-201ENST00000392855 326 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 ZNF603P-201ENST00000405613 487 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 AL603766.1-201ENST00000407763 664 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 RNU4-6P-201ENST00000410804 122 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 OR8G2P-201ENST00000412796 908 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC115285.1-201ENST00000424879 736 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC073069.1-201ENST00000428657 441 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 MTCO1P57-201ENST00000432182 261 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 AF228730.2-201ENST00000438784 848 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 RPS17P13-201ENST00000448974 407 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 HMGB3P21-201ENST00000452483 547 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 RPS7P7-201ENST00000463499 571 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC104629.2-201ENST00000468627 598 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 S100A11P1-201ENST00000477525 312 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC018797.3-201ENST00000513388 1241 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS1Q01581 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 AL360157.1-201ENST00000565962 87 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC091167.4-201ENST00000605079 184 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 AL591034.3-201ENST00000605511 685 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC004825.2-201ENST00000616634 455 ntBASIC3.78□□□□□ -1.8
HMGCS1Q01581 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS1Q01581 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS1Q01581 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HMGCS1Q01581 AC134882.1-201ENST00000603738 1676 ntBASIC3.78□□□□□ -1.81
HMGCS1Q01581 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
HMGCS1Q01581 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.77□□□□□ -1.81
HMGCS1Q01581 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HMGCS1Q01581 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGCS1Q01581 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.77□□□□□ -1.81
HMGCS1Q01581 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HMGCS1Q01581 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HMGCS1Q01581 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.77□□□□□ -1.81
HMGCS1Q01581 AL512504.1-201ENST00000415494 778 ntBASIC3.77□□□□□ -1.81
HMGCS1Q01581 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGCS1Q01581 USP12PY-201ENST00000427677 1064 ntBASIC3.77□□□□□ -1.81
HMGCS1Q01581 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGCS1Q01581 MTCYBP29-201ENST00000436327 1006 ntBASIC3.77□□□□□ -1.81
HMGCS1Q01581 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HMGCS1Q01581 AC114755.5-201ENST00000447760 831 ntBASIC3.77□□□□□ -1.81
HMGCS1Q01581 AL500522.2-201ENST00000448562 343 ntBASIC3.77□□□□□ -1.81
HMGCS1Q01581 AC239809.1-201ENST00000450470 217 ntBASIC3.77□□□□□ -1.81
HMGCS1Q01581 AL645939.1-201ENST00000453429 797 ntBASIC3.77□□□□□ -1.81
HMGCS1Q01581 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.77□□□□□ -1.81
HMGCS1Q01581 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.77□□□□□ -1.81
HMGCS1Q01581 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGCS1Q01581 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
HMGCS1Q01581 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms