Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC2.86□□□□□ -1.95
CKS1BP61024 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC2.86□□□□□ -1.95
CKS1BP61024 RPEP2-201ENST00000432149 701 ntBASIC2.86□□□□□ -1.95
CKS1BP61024 HSPE1P28-201ENST00000443139 211 ntBASIC2.86□□□□□ -1.95
CKS1BP61024 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.86□□□□□ -1.95
CKS1BP61024 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC2.86□□□□□ -1.95
CKS1BP61024 RAD23BP3-201ENST00000454157 1152 ntBASIC2.86□□□□□ -1.95
CKS1BP61024 AC146507.1-201ENST00000468335 354 ntBASIC2.86□□□□□ -1.95
CKS1BP61024 AC008953.1-201ENST00000497334 318 ntBASIC2.86□□□□□ -1.95
CKS1BP61024 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.86□□□□□ -1.95
CKS1BP61024 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CKS1BP61024 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC2.86□□□□□ -1.95
CKS1BP61024 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.86□□□□□ -1.95
CKS1BP61024 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC2.86□□□□□ -1.95
CKS1BP61024 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC2.86□□□□□ -1.95
CKS1BP61024 IGLVVI-25-1-201ENST00000521893 249 ntBASIC2.86□□□□□ -1.95
CKS1BP61024 OR5BC1P-201ENST00000529327 739 ntBASIC2.86□□□□□ -1.95
CKS1BP61024 AP001781.1-201ENST00000530977 207 ntBASIC2.86□□□□□ -1.95
CKS1BP61024 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC2.86□□□□□ -1.95
CKS1BP61024 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC2.86□□□□□ -1.95
CKS1BP61024 AC073091.2-201ENST00000603205 907 ntBASIC2.86□□□□□ -1.95
CKS1BP61024 AC079587.1-201ENST00000603846 277 ntBASIC2.86□□□□□ -1.95
CKS1BP61024 AC128687.2-201ENST00000609657 566 ntBASIC2.86□□□□□ -1.95
CKS1BP61024 AC019176.2-201ENST00000611579 315 ntBASIC2.86□□□□□ -1.95
CKS1BP61024 AP003497.2-201ENST00000624220 967 ntBASIC2.86□□□□□ -1.95
CKS1BP61024 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC2.86□□□□□ -1.95
CKS1BP61024 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.86□□□□□ -1.95
CKS1BP61024 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CKS1BP61024 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CKS1BP61024 CR381670.1-201ENST00000624291 1693 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CKS1BP61024 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CKS1BP61024 MTND5P3-201ENST00000438536 1800 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.85□□□□□ -1.95
CKS1BP61024 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CKS1BP61024 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CKS1BP61024 MTCYBP7-201ENST00000419540 1134 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 DNAJA1P1-201ENST00000425106 1187 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC2.85□□□□□ -1.95
CKS1BP61024 HMGB1P45-201ENST00000435986 653 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 RPL23AP46-201ENST00000438548 490 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.85□□□□□ -1.95
CKS1BP61024 TRIM60P18-201ENST00000441518 828 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.85□□□□□ -1.95
CKS1BP61024 RPL31P44-201ENST00000447680 377 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 VN1R48P-201ENST00000448149 1036 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 HMGN2P16-201ENST00000456802 261 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 AC007688.1-201ENST00000475592 759 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 RPS29P19-201ENST00000479709 171 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 AC093763.2-201ENST00000505334 1223 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC2.85□□□□□ -1.95
CKS1BP61024 RNU4-60P-201ENST00000517239 135 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 IGKV1-32-201ENST00000519290 311 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.85□□□□□ -1.95
CKS1BP61024 AC006064.5-201ENST00000541782 248 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC2.85□□□□□ -1.95
CKS1BP61024 AC063950.1-201ENST00000552036 308 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC2.85□□□□□ -1.95
CKS1BP61024 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.85□□□□□ -1.95
CKS1BP61024 MIR4425-201ENST00000580572 84 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 MIR4310-201ENST00000582950 57 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 EIF4A2P1-201ENST00000587313 1063 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CKS1BP61024 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC2.85□□□□□ -1.95
CKS1BP61024 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC2.85□□□□□ -1.95
CKS1BP61024 AC008785.1-201ENST00000624475 456 ntBASIC2.85□□□□□ -1.95
CKS1BP61024 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.85□□□□□ -1.95
CKS1BP61024 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CKS1BP61024 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CKS1BP61024 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CKS1BP61024 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CKS1BP61024 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CKS1BP61024 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CKS1BP61024 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.85□□□□□ -1.95
CKS1BP61024 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CKS1BP61024 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CKS1BP61024 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
CKS1BP61024 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CKS1BP61024 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CKS1BP61024 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CKS1BP61024 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
CKS1BP61024 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CKS1BP61024 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.84□□□□□ -1.95
CKS1BP61024 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.84□□□□□ -1.95
CKS1BP61024 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
CKS1BP61024 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.84□□□□□ -1.95
CKS1BP61024 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CKS1BP61024 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
CKS1BP61024 MIR320B1-201ENST00000390209 79 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 AL133270.1-201ENST00000402635 279 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 UQCRBP1-201ENST00000421129 336 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.84□□□□□ -1.95
CKS1BP61024 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.84□□□□□ -1.95
CKS1BP61024 AC007563.3-201ENST00000433233 371 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 HIGD1AP11-201ENST00000438361 280 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 RPL7P59-201ENST00000447700 943 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC2.84□□□□□ -1.95
CKS1BP61024 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC2.84□□□□□ -1.95
CKS1BP61024 AC006539.3-201ENST00000454258 129 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms