Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.83□□□□□ -1.8
VSX2P58304 Z99127.2-201ENST00000441426 334 ntBASIC3.83□□□□□ -1.8
VSX2P58304 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.83□□□□□ -1.8
VSX2P58304 RPL5P13-201ENST00000462840 709 ntBASIC3.83□□□□□ -1.8
VSX2P58304 RPS4XP15-201ENST00000489210 795 ntBASIC3.83□□□□□ -1.8
VSX2P58304 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.83□□□□□ -1.8
VSX2P58304 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.83□□□□□ -1.8
VSX2P58304 AC117525.1-201ENST00000515228 503 ntBASIC3.83□□□□□ -1.8
VSX2P58304 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.83□□□□□ -1.8
VSX2P58304 AC104997.1-201ENST00000519761 717 ntBASIC3.83□□□□□ -1.8
VSX2P58304 MTND1P6-201ENST00000523621 946 ntBASIC3.83□□□□□ -1.8
VSX2P58304 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.83□□□□□ -1.8
VSX2P58304 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.83□□□□□ -1.8
VSX2P58304 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.83□□□□□ -1.8
VSX2P58304 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.83□□□□□ -1.8
VSX2P58304 AC104662.1-201ENST00000604448 511 ntBASIC3.83□□□□□ -1.8
VSX2P58304 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VSX2P58304 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VSX2P58304 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VSX2P58304 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
VSX2P58304 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.83□□□□□ -1.8
VSX2P58304 AC008725.1-201ENST00000605123 2263 ntBASIC3.83□□□□□ -1.8
VSX2P58304 AC097504.1-201ENST00000515103 2415 ntBASIC3.83□□□□□ -1.8
VSX2P58304 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.83□□□□□ -1.8
VSX2P58304 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.83□□□□□ -1.8
VSX2P58304 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VSX2P58304 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VSX2P58304 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VSX2P58304 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VSX2P58304 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
VSX2P58304 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VSX2P58304 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VSX2P58304 AC027287.1-201ENST00000553115 1453 ntBASIC3.82□□□□□ -1.8
VSX2P58304 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VSX2P58304 AC083899.2-201ENST00000423285 1376 ntBASIC3.82□□□□□ -1.8
VSX2P58304 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VSX2P58304 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.82□□□□□ -1.8
VSX2P58304 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.82□□□□□ -1.8
VSX2P58304 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
VSX2P58304 HMGB3P19-201ENST00000403971 560 ntBASIC3.82□□□□□ -1.8
VSX2P58304 AC092647.1-201ENST00000420654 287 ntBASIC3.82□□□□□ -1.8
VSX2P58304 RPL7P2-201ENST00000427639 268 ntBASIC3.82□□□□□ -1.8
VSX2P58304 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VSX2P58304 MTCYBP29-201ENST00000436327 1006 ntBASIC3.82□□□□□ -1.8
VSX2P58304 HMGB3P22-202ENST00000451823 572 ntBASIC3.82□□□□□ -1.8
VSX2P58304 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.82□□□□□ -1.8
VSX2P58304 AC010460.1-201ENST00000507087 466 ntBASIC3.82□□□□□ -1.8
VSX2P58304 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.82□□□□□ -1.8
VSX2P58304 AC108471.1-201ENST00000513977 287 ntBASIC3.82□□□□□ -1.8
VSX2P58304 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.82□□□□□ -1.8
VSX2P58304 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
VSX2P58304 AC091516.1-201ENST00000549191 703 ntBASIC3.82□□□□□ -1.8
VSX2P58304 AC107016.1-201ENST00000550463 337 ntBASIC3.82□□□□□ -1.8
VSX2P58304 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.82□□□□□ -1.8
VSX2P58304 AC007424.1-203ENST00000554613 687 ntBASIC3.82□□□□□ -1.8
VSX2P58304 AC106785.1-201ENST00000565935 262 ntBASIC3.82□□□□□ -1.8
VSX2P58304 MIR1254-2-201ENST00000579553 63 ntBASIC3.82□□□□□ -1.8
VSX2P58304 AC053481.4-201ENST00000583164 216 ntBASIC3.82□□□□□ -1.8
VSX2P58304 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.82□□□□□ -1.8
VSX2P58304 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.82□□□□□ -1.8
VSX2P58304 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.82□□□□□ -1.8
VSX2P58304 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.82□□□□□ -1.8
VSX2P58304 AC005021.1-201ENST00000608730 355 ntBASIC3.82□□□□□ -1.8
VSX2P58304 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
VSX2P58304 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.82□□□□□ -1.8
VSX2P58304 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VSX2P58304 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.82□□□□□ -1.8
VSX2P58304 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.82□□□□□ -1.8
VSX2P58304 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VSX2P58304 AL356489.2-201ENST00000566968 3528 ntBASIC3.82□□□□□ -1.8
VSX2P58304 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.82□□□□□ -1.8
VSX2P58304 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
VSX2P58304 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VSX2P58304 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.82□□□□□ -1.8
VSX2P58304 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VSX2P58304 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VSX2P58304 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VSX2P58304 AC017007.4-201ENST00000503353 1352 ntBASIC3.81□□□□□ -1.8
VSX2P58304 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VSX2P58304 MIR421-201ENST00000365696 85 ntBASIC3.81□□□□□ -1.8
VSX2P58304 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.81□□□□□ -1.8
VSX2P58304 MIR1251-201ENST00000408552 70 ntBASIC3.81□□□□□ -1.8
VSX2P58304 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.81□□□□□ -1.8
VSX2P58304 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.81□□□□□ -1.8
VSX2P58304 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.81□□□□□ -1.8
VSX2P58304 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.81□□□□□ -1.8
VSX2P58304 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.81□□□□□ -1.8
VSX2P58304 AC122718.1-201ENST00000439448 744 ntBASIC3.81□□□□□ -1.8
VSX2P58304 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.81□□□□□ -1.8
VSX2P58304 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.81□□□□□ -1.8
VSX2P58304 CDC27P1-201ENST00000445384 715 ntBASIC3.81□□□□□ -1.8
VSX2P58304 HMGB1P16-201ENST00000447155 540 ntBASIC3.81□□□□□ -1.8
VSX2P58304 AC239367.2-201ENST00000447309 705 ntBASIC3.81□□□□□ -1.8
VSX2P58304 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.81□□□□□ -1.8
VSX2P58304 FABP3P2-201ENST00000453169 399 ntBASIC3.81□□□□□ -1.8
VSX2P58304 AL645939.1-201ENST00000453429 797 ntBASIC3.81□□□□□ -1.8
VSX2P58304 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.81□□□□□ -1.8
VSX2P58304 FAM133DP-201ENST00000464802 691 ntBASIC3.81□□□□□ -1.8
VSX2P58304 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.81□□□□□ -1.8
VSX2P58304 VN1R105P-201ENST00000486595 910 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms