Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.36□□□□□ -1.55
GFRA1P56159 AC009229.4-201ENST00000623854 1947 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
GFRA1P56159 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.36□□□□□ -1.55
GFRA1P56159 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
GFRA1P56159 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.36□□□□□ -1.55
GFRA1P56159 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
GFRA1P56159 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA1P56159 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA1P56159 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.35□□□□□ -1.55
GFRA1P56159 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA1P56159 THAP12P9-201ENST00000503971 2360 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
GFRA1P56159 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.35□□□□□ -1.55
GFRA1P56159 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA1P56159 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.35□□□□□ -1.55
GFRA1P56159 CASC19-280ENST00000642102 1351 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 AL161781.1-201ENST00000354277 403 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 Y_RNA.89-201ENST00000363031 102 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 RNA5SP500-201ENST00000364486 119 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 RNU6-343P-201ENST00000364709 104 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.35□□□□□ -1.55
GFRA1P56159 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
GFRA1P56159 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.35□□□□□ -1.55
GFRA1P56159 RPS4XP5-201ENST00000419038 768 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 AL389925.1-201ENST00000432257 728 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 MTCYBP45-201ENST00000435243 565 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 AC073109.1-201ENST00000445066 978 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 UBE2V1P7-201ENST00000446395 340 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.35□□□□□ -1.55
GFRA1P56159 RPS20P32-201ENST00000456044 356 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.35□□□□□ -1.55
GFRA1P56159 RPL38P1-201ENST00000460914 211 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 APOOP2-201ENST00000461561 539 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 AC011411.1-201ENST00000509592 876 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.35□□□□□ -1.55
GFRA1P56159 SNORA20.3-201ENST00000516880 132 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.35□□□□□ -1.55
GFRA1P56159 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.35□□□□□ -1.55
GFRA1P56159 AC022616.6-201ENST00000520479 119 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.35□□□□□ -1.55
GFRA1P56159 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA1P56159 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.35□□□□□ -1.55
GFRA1P56159 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.35□□□□□ -1.55
GFRA1P56159 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA1P56159 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.35□□□□□ -1.55
GFRA1P56159 AL512360.1-201ENST00000555346 234 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.35□□□□□ -1.55
GFRA1P56159 AC008752.3-201ENST00000588113 712 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 MIR132-201ENST00000591554 101 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.35□□□□□ -1.55
GFRA1P56159 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.35□□□□□ -1.55
GFRA1P56159 AC012507.3-201ENST00000603556 477 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 RPL23AP92-201ENST00000603609 255 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 AC005191.1-201ENST00000603950 358 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 AC116447.1-201ENST00000613153 453 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.35□□□□□ -1.55
GFRA1P56159 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
GFRA1P56159 AC000123.2-201ENST00000623124 461 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 AC091905.1-201ENST00000624400 311 ntBASIC5.35□□□□□ -1.55
GFRA1P56159 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
GFRA1P56159 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA1P56159 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA1P56159 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.35□□□□□ -1.55
GFRA1P56159 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
GFRA1P56159 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
GFRA1P56159 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA1P56159 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.34□□□□□ -1.55
GFRA1P56159 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
GFRA1P56159 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.34□□□□□ -1.55
GFRA1P56159 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
GFRA1P56159 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
GFRA1P56159 AC091305.2-201ENST00000624049 1576 ntBASIC5.34□□□□□ -1.55
GFRA1P56159 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.34□□□□□ -1.55
GFRA1P56159 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
GFRA1P56159 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
GFRA1P56159 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.34□□□□□ -1.55
GFRA1P56159 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.34□□□□□ -1.55
GFRA1P56159 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA1P56159 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA1P56159 OR52B3P-201ENST00000314715 928 ntBASIC5.34□□□□□ -1.55
GFRA1P56159 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
GFRA1P56159 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
GFRA1P56159 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA1P56159 RNU6-534P-201ENST00000364877 106 ntBASIC5.34□□□□□ -1.55
GFRA1P56159 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
GFRA1P56159 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA1P56159 Y_RNA.409-201ENST00000383990 98 ntBASIC5.34□□□□□ -1.55
GFRA1P56159 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA1P56159 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.34□□□□□ -1.55
GFRA1P56159 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.34□□□□□ -1.55
GFRA1P56159 MTATP6P27-201ENST00000416987 621 ntBASIC5.34□□□□□ -1.55
GFRA1P56159 AC073136.2-201ENST00000417282 849 ntBASIC5.34□□□□□ -1.55
GFRA1P56159 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms