Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDH6P55285 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.13□□□□□ -1.75
CDH6P55285 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDH6P55285 OR8G2P-201ENST00000412796 908 ntBASIC4.13□□□□□ -1.75
CDH6P55285 AC013404.1-201ENST00000413068 249 ntBASIC4.13□□□□□ -1.75
CDH6P55285 RPL7AP73-201ENST00000413490 353 ntBASIC4.13□□□□□ -1.75
CDH6P55285 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH6P55285 AC115285.1-201ENST00000424879 736 ntBASIC4.13□□□□□ -1.75
CDH6P55285 HIGD1AP4-201ENST00000430194 280 ntBASIC4.13□□□□□ -1.75
CDH6P55285 BX119904.1-201ENST00000432026 348 ntBASIC4.13□□□□□ -1.75
CDH6P55285 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH6P55285 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.13□□□□□ -1.75
CDH6P55285 AC023512.1-201ENST00000444513 499 ntBASIC4.13□□□□□ -1.75
CDH6P55285 AL451050.1-201ENST00000450126 415 ntBASIC4.13□□□□□ -1.75
CDH6P55285 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH6P55285 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH6P55285 AL132838.2-201ENST00000492041 314 ntBASIC4.13□□□□□ -1.75
CDH6P55285 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH6P55285 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH6P55285 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH6P55285 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH6P55285 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.13□□□□□ -1.75
CDH6P55285 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH6P55285 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH6P55285 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.13□□□□□ -1.75
CDH6P55285 MIR4512-201ENST00000583257 77 ntBASIC4.13□□□□□ -1.75
CDH6P55285 AL590392.1-201ENST00000604960 446 ntBASIC4.13□□□□□ -1.75
CDH6P55285 BNIP3P7-201ENST00000605641 516 ntBASIC4.13□□□□□ -1.75
CDH6P55285 AC011472.4-201ENST00000615848 491 ntBASIC4.13□□□□□ -1.75
CDH6P55285 AC007342.8-201ENST00000623278 678 ntBASIC4.13□□□□□ -1.75
CDH6P55285 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDH6P55285 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDH6P55285 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH6P55285 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH6P55285 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH6P55285 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH6P55285 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH6P55285 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CDH6P55285 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH6P55285 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH6P55285 RNU6-244P-201ENST00000391028 104 ntBASIC4.12□□□□□ -1.75
CDH6P55285 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.12□□□□□ -1.75
CDH6P55285 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH6P55285 KCTD9P3-201ENST00000434597 1169 ntBASIC4.12□□□□□ -1.75
CDH6P55285 TBCAP1-201ENST00000436520 327 ntBASIC4.12□□□□□ -1.75
CDH6P55285 HMGB1P37-201ENST00000439613 609 ntBASIC4.12□□□□□ -1.75
CDH6P55285 XKRYP6-201ENST00000440468 1116 ntBASIC4.12□□□□□ -1.75
CDH6P55285 XKRYP3-201ENST00000442113 1116 ntBASIC4.12□□□□□ -1.75
CDH6P55285 AC114755.5-201ENST00000447760 831 ntBASIC4.12□□□□□ -1.75
CDH6P55285 HMGB3P22-202ENST00000451823 572 ntBASIC4.12□□□□□ -1.75
CDH6P55285 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH6P55285 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH6P55285 RPS7P7-201ENST00000463499 571 ntBASIC4.12□□□□□ -1.75
CDH6P55285 AC010683.1-201ENST00000473673 378 ntBASIC4.12□□□□□ -1.75
CDH6P55285 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH6P55285 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH6P55285 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH6P55285 AC026726.1-201ENST00000512859 601 ntBASIC4.12□□□□□ -1.75
CDH6P55285 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH6P55285 AC016550.3-201ENST00000515706 767 ntBASIC4.12□□□□□ -1.75
CDH6P55285 IGHV3-32-201ENST00000519182 355 ntBASIC4.12□□□□□ -1.75
CDH6P55285 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH6P55285 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH6P55285 AC091516.1-201ENST00000549191 703 ntBASIC4.12□□□□□ -1.75
CDH6P55285 AC074029.2-201ENST00000551045 634 ntBASIC4.12□□□□□ -1.75
CDH6P55285 CBX3P5-201ENST00000552017 521 ntBASIC4.12□□□□□ -1.75
CDH6P55285 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH6P55285 MRPS35P3-201ENST00000603189 709 ntBASIC4.12□□□□□ -1.75
CDH6P55285 AC022387.2-201ENST00000604050 448 ntBASIC4.12□□□□□ -1.75
CDH6P55285 AL591034.3-201ENST00000605511 685 ntBASIC4.12□□□□□ -1.75
CDH6P55285 AC243654.2-201ENST00000612843 443 ntBASIC4.12□□□□□ -1.75
CDH6P55285 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDH6P55285 AC074276.2-201ENST00000619891 348 ntBASIC4.12□□□□□ -1.75
CDH6P55285 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH6P55285 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH6P55285 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH6P55285 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CDH6P55285 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH6P55285 CASC19-261ENST00000641853 1638 ntBASIC4.12□□□□□ -1.75
CDH6P55285 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CDH6P55285 IPO8P1-201ENST00000455509 3109 ntBASIC4.12□□□□□ -1.75
CDH6P55285 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH6P55285 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH6P55285 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.11□□□□□ -1.75
CDH6P55285 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH6P55285 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH6P55285 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH6P55285 AL121657.1-201ENST00000327215 531 ntBASIC4.11□□□□□ -1.75
CDH6P55285 SNORA62.2-201ENST00000364672 152 ntBASIC4.11□□□□□ -1.75
CDH6P55285 RNU4-6P-201ENST00000410804 122 ntBASIC4.11□□□□□ -1.75
CDH6P55285 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH6P55285 AL356095.1-201ENST00000417217 199 ntBASIC4.11□□□□□ -1.75
CDH6P55285 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH6P55285 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH6P55285 YWHAEP5-201ENST00000431545 765 ntBASIC4.11□□□□□ -1.75
CDH6P55285 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.11□□□□□ -1.75
CDH6P55285 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH6P55285 AC104306.1-201ENST00000449702 371 ntBASIC4.11□□□□□ -1.75
CDH6P55285 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH6P55285 RPL7P31-201ENST00000450192 724 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms