Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 MTND6P33-201ENST00000571794 183 ntBASIC5.26□□□□□ -1.57
MSH6P52701 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.26□□□□□ -1.57
MSH6P52701 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
MSH6P52701 AC015922.4-201ENST00000612568 690 ntBASIC5.26□□□□□ -1.57
MSH6P52701 AC010809.3-201ENST00000621310 641 ntBASIC5.26□□□□□ -1.57
MSH6P52701 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.26□□□□□ -1.57
MSH6P52701 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
MSH6P52701 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.25□□□□□ -1.57
MSH6P52701 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
MSH6P52701 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
MSH6P52701 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
MSH6P52701 AC097504.1-201ENST00000515103 2415 ntBASIC5.25□□□□□ -1.57
MSH6P52701 SCN1A-220ENST00000641603 12506 ntBASIC5.25□□□□□ -1.57
MSH6P52701 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
MSH6P52701 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MSH6P52701 SNORA3C-201ENST00000408792 125 ntBASIC5.25□□□□□ -1.57
MSH6P52701 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.25□□□□□ -1.57
MSH6P52701 AC017083.1-201ENST00000428093 483 ntBASIC5.25□□□□□ -1.57
MSH6P52701 HLA-N-201ENST00000437516 135 ntBASIC5.25□□□□□ -1.57
MSH6P52701 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.25□□□□□ -1.57
MSH6P52701 RPSAP41-201ENST00000439695 860 ntBASIC5.25□□□□□ -1.57
MSH6P52701 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.25□□□□□ -1.57
MSH6P52701 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
MSH6P52701 HMGB1P19-201ENST00000517578 577 ntBASIC5.25□□□□□ -1.57
MSH6P52701 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.25□□□□□ -1.57
MSH6P52701 EIF4BP1-201ENST00000554881 351 ntBASIC5.25□□□□□ -1.57
MSH6P52701 AC084759.1-201ENST00000561168 290 ntBASIC5.25□□□□□ -1.57
MSH6P52701 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC5.25□□□□□ -1.57
MSH6P52701 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC5.25□□□□□ -1.57
MSH6P52701 MIR4325-201ENST00000583049 90 ntBASIC5.25□□□□□ -1.57
MSH6P52701 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.25□□□□□ -1.57
MSH6P52701 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.25□□□□□ -1.57
MSH6P52701 AC244517.3-201ENST00000616254 1235 ntBASIC5.25□□□□□ -1.57
MSH6P52701 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.25□□□□□ -1.57
MSH6P52701 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
MSH6P52701 AC027290.2-201ENST00000623210 18662 ntBASIC5.25□□□□□ -1.57
MSH6P52701 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
MSH6P52701 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
MSH6P52701 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MSH6P52701 AC068254.2-201ENST00000623938 3577 ntBASIC5.24□□□□□ -1.57
MSH6P52701 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MSH6P52701 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
MSH6P52701 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
MSH6P52701 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MSH6P52701 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.24□□□□□ -1.57
MSH6P52701 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
MSH6P52701 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.24□□□□□ -1.57
MSH6P52701 UBA52P6-201ENST00000399822 382 ntBASIC5.24□□□□□ -1.57
MSH6P52701 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.24□□□□□ -1.57
MSH6P52701 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.24□□□□□ -1.57
MSH6P52701 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.24□□□□□ -1.57
MSH6P52701 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.24□□□□□ -1.57
MSH6P52701 RBMY2UP-201ENST00000453474 324 ntBASIC5.24□□□□□ -1.57
MSH6P52701 RPS27AP1-201ENST00000475545 471 ntBASIC5.24□□□□□ -1.57
MSH6P52701 AC025554.1-201ENST00000505641 188 ntBASIC5.24□□□□□ -1.57
MSH6P52701 AC069306.1-201ENST00000507006 843 ntBASIC5.24□□□□□ -1.57
MSH6P52701 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.24□□□□□ -1.57
MSH6P52701 PPBPP1-201ENST00000510807 373 ntBASIC5.24□□□□□ -1.57
MSH6P52701 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.24□□□□□ -1.57
MSH6P52701 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.24□□□□□ -1.57
MSH6P52701 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.24□□□□□ -1.57
MSH6P52701 AC011611.1-201ENST00000552179 197 ntBASIC5.24□□□□□ -1.57
MSH6P52701 GNRHR2P1-201ENST00000555315 631 ntBASIC5.24□□□□□ -1.57
MSH6P52701 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.24□□□□□ -1.57
MSH6P52701 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.24□□□□□ -1.57
MSH6P52701 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.24□□□□□ -1.57
MSH6P52701 AL354760.1-201ENST00000608357 643 ntBASIC5.24□□□□□ -1.57
MSH6P52701 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MSH6P52701 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.24□□□□□ -1.57
MSH6P52701 AL133383.2-201ENST00000622958 2336 ntBASIC5.24□□□□□ -1.57
MSH6P52701 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.24□□□□□ -1.57
MSH6P52701 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
MSH6P52701 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.24□□□□□ -1.57
MSH6P52701 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MSH6P52701 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MSH6P52701 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
MSH6P52701 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.23□□□□□ -1.57
MSH6P52701 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MSH6P52701 AC007823.1-201ENST00000569932 1566 ntBASIC5.23□□□□□ -1.57
MSH6P52701 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.23□□□□□ -1.57
MSH6P52701 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MSH6P52701 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MSH6P52701 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MSH6P52701 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.23□□□□□ -1.57
MSH6P52701 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MSH6P52701 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.23□□□□□ -1.57
MSH6P52701 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.23□□□□□ -1.57
MSH6P52701 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
MSH6P52701 RANP9-201ENST00000519957 271 ntBASIC5.23□□□□□ -1.57
MSH6P52701 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.23□□□□□ -1.57
MSH6P52701 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
MSH6P52701 AC104662.1-201ENST00000604448 511 ntBASIC5.23□□□□□ -1.57
MSH6P52701 AC116312.1-201ENST00000606841 314 ntBASIC5.23□□□□□ -1.57
MSH6P52701 MARK2P15-201ENST00000432204 2186 ntBASIC5.23□□□□□ -1.57
MSH6P52701 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MSH6P52701 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MSH6P52701 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.23□□□□□ -1.57
MSH6P52701 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
MSH6P52701 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.22□□□□□ -1.57
MSH6P52701 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms