Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC087190.4-201ENST00000574616 8334 ntBASIC4.42□□□□□ -1.7
HNF4AP41235 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HNF4AP41235 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HNF4AP41235 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HNF4AP41235 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HNF4AP41235 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HNF4AP41235 RNU1-20P-201ENST00000363314 162 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 MIR585-201ENST00000384887 94 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HNF4AP41235 LAP3P1-201ENST00000403648 294 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 AC008173.1-201ENST00000418901 264 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 MTCO2P1-201ENST00000424648 477 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 USP9YP7-201ENST00000436723 430 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 HMGN1P5-201ENST00000448591 263 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 USP9YP32-201ENST00000452432 430 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 ATP5G1P3-201ENST00000463301 410 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 RN7SL41P-201ENST00000476144 297 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 RPL21P47-201ENST00000483696 477 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 MTND4LP2-201ENST00000502312 285 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 AC018797.3-201ENST00000513388 1241 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.41□□□□□ -1.7
HNF4AP41235 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.41□□□□□ -1.7
HNF4AP41235 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.41□□□□□ -1.7
HNF4AP41235 AC104072.1-201ENST00000568817 668 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.41□□□□□ -1.7
HNF4AP41235 MIR4760-201ENST00000585040 80 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HNF4AP41235 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.41□□□□□ -1.7
HNF4AP41235 BNIP3P32-201ENST00000600015 554 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 AC133794.1-201ENST00000602731 914 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 AC008536.1-201ENST00000602872 669 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 AL139286.1-201ENST00000604465 483 ntBASIC4.41□□□□□ -1.7
HNF4AP41235 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HNF4AP41235 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
HNF4AP41235 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HNF4AP41235 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HNF4AP41235 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HNF4AP41235 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HNF4AP41235 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HNF4AP41235 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.4□□□□□ -1.7
HNF4AP41235 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
HNF4AP41235 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HNF4AP41235 RNU6-609P-201ENST00000365459 107 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HNF4AP41235 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HNF4AP41235 RNU4-27P-201ENST00000410889 139 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 AL158050.1-201ENST00000416077 457 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 AC062016.2-201ENST00000420950 676 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 AC234779.1-201ENST00000425910 285 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 RPS12P10-201ENST00000427031 377 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.4□□□□□ -1.71
HNF4AP41235 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.4□□□□□ -1.71
HNF4AP41235 MRPL50P1-201ENST00000431951 384 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 AC092170.1-201ENST00000440211 356 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.4□□□□□ -1.71
HNF4AP41235 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.4□□□□□ -1.71
HNF4AP41235 AC004865.1-201ENST00000442276 1003 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.4□□□□□ -1.71
HNF4AP41235 RPL7P55-201ENST00000450522 746 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.4□□□□□ -1.71
HNF4AP41235 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.4□□□□□ -1.71
HNF4AP41235 SNRPGP5-201ENST00000456003 220 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.4□□□□□ -1.71
HNF4AP41235 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.4□□□□□ -1.71
HNF4AP41235 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 AC010326.1-201ENST00000462726 602 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 RPL23AP72-201ENST00000492447 435 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 AC008897.1-201ENST00000494006 347 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.4□□□□□ -1.71
HNF4AP41235 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.4□□□□□ -1.71
HNF4AP41235 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.4□□□□□ -1.71
HNF4AP41235 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.4□□□□□ -1.71
HNF4AP41235 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.4□□□□□ -1.71
HNF4AP41235 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.4□□□□□ -1.71
HNF4AP41235 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.4□□□□□ -1.71
HNF4AP41235 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.4□□□□□ -1.71
HNF4AP41235 AC093510.2-201ENST00000562820 896 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 AC095057.3-201ENST00000567102 1157 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.4□□□□□ -1.71
HNF4AP41235 AL133338.2-201ENST00000604292 736 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 AC034229.4-201ENST00000607861 441 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 AC116651.1-201ENST00000609724 556 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 AC091905.2-201ENST00000623143 306 ntBASIC4.4□□□□□ -1.71
HNF4AP41235 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.4□□□□□ -1.71
HNF4AP41235 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HNF4AP41235 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HNF4AP41235 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HNF4AP41235 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.4□□□□□ -1.71
HNF4AP41235 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HNF4AP41235 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
HNF4AP41235 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HNF4AP41235 MTND5P3-201ENST00000438536 1800 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HNF4AP41235 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HNF4AP41235 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HNF4AP41235 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HNF4AP41235 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HNF4AP41235 MIR16-2-201ENST00000362117 81 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 RNU1-108P-201ENST00000362556 161 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 MIR525-201ENST00000384978 85 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms