Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.05□□□□□ -1.6
CIITAP33076 IGKV2D-10-201ENST00000520194 281 ntBASIC5.05□□□□□ -1.6
CIITAP33076 AC107918.3-201ENST00000533272 382 ntBASIC5.05□□□□□ -1.6
CIITAP33076 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.05□□□□□ -1.6
CIITAP33076 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.05□□□□□ -1.6
CIITAP33076 AC233702.9-201ENST00000581528 203 ntBASIC5.05□□□□□ -1.6
CIITAP33076 MIR548Y-201ENST00000582739 110 ntBASIC5.05□□□□□ -1.6
CIITAP33076 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.05□□□□□ -1.6
CIITAP33076 PCNAP1-202ENST00000595299 752 ntBASIC5.05□□□□□ -1.6
CIITAP33076 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.05□□□□□ -1.6
CIITAP33076 AC013444.2-201ENST00000603317 787 ntBASIC5.05□□□□□ -1.6
CIITAP33076 AC079587.1-201ENST00000603846 277 ntBASIC5.05□□□□□ -1.6
CIITAP33076 ELOCP34-201ENST00000604436 327 ntBASIC5.05□□□□□ -1.6
CIITAP33076 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.05□□□□□ -1.6
CIITAP33076 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.05□□□□□ -1.6
CIITAP33076 AL121890.3-201ENST00000618494 516 ntBASIC5.05□□□□□ -1.6
CIITAP33076 U6.48-201ENST00000618523 106 ntBASIC5.05□□□□□ -1.6
CIITAP33076 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CIITAP33076 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.05□□□□□ -1.6
CIITAP33076 AC091905.2-201ENST00000623143 306 ntBASIC5.05□□□□□ -1.6
CIITAP33076 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.05□□□□□ -1.6
CIITAP33076 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.05□□□□□ -1.6
CIITAP33076 AC139713.2-210ENST00000641741 992 ntBASIC5.05□□□□□ -1.6
CIITAP33076 MAPK10-320ENST00000641462 6696 ntBASIC5.05□□□□□ -1.6
CIITAP33076 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CIITAP33076 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CIITAP33076 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CIITAP33076 AC099786.3-201ENST00000565735 1410 ntBASIC5.05□□□□□ -1.6
CIITAP33076 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
CIITAP33076 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CIITAP33076 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CIITAP33076 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CIITAP33076 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.04□□□□□ -1.6
CIITAP33076 AC083843.3-201ENST00000623679 2186 ntBASIC5.04□□□□□ -1.6
CIITAP33076 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CIITAP33076 AC008033.1-201ENST00000216407 1162 ntBASIC5.04□□□□□ -1.6
CIITAP33076 RNU6-236P-201ENST00000363886 106 ntBASIC5.04□□□□□ -1.6
CIITAP33076 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.04□□□□□ -1.6
CIITAP33076 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CIITAP33076 RNU1-63P-201ENST00000383902 164 ntBASIC5.04□□□□□ -1.6
CIITAP33076 SNORD65C-201ENST00000390962 71 ntBASIC5.04□□□□□ -1.6
CIITAP33076 HMGB1P13-201ENST00000406019 642 ntBASIC5.04□□□□□ -1.6
CIITAP33076 UBE2V1P11-201ENST00000411559 285 ntBASIC5.04□□□□□ -1.6
CIITAP33076 VDAC1P9-201ENST00000412766 841 ntBASIC5.04□□□□□ -1.6
CIITAP33076 RPS24P7-201ENST00000416921 246 ntBASIC5.04□□□□□ -1.6
CIITAP33076 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.04□□□□□ -1.6
CIITAP33076 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.04□□□□□ -1.6
CIITAP33076 CDY14P-201ENST00000431260 1014 ntBASIC5.04□□□□□ -1.6
CIITAP33076 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.04□□□□□ -1.6
CIITAP33076 TMX2P1-201ENST00000436507 708 ntBASIC5.04□□□□□ -1.6
CIITAP33076 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.04□□□□□ -1.6
CIITAP33076 PTGES3P1-201ENST00000439531 483 ntBASIC5.04□□□□□ -1.6
CIITAP33076 CDY12P-201ENST00000440679 1015 ntBASIC5.04□□□□□ -1.6
CIITAP33076 HSFY3P-201ENST00000444242 1191 ntBASIC5.04□□□□□ -1.6
CIITAP33076 CDY13P-201ENST00000445813 1015 ntBASIC5.04□□□□□ -1.6
CIITAP33076 SEPT14P24-201ENST00000447236 180 ntBASIC5.04□□□□□ -1.6
CIITAP33076 EIF4A1P11-201ENST00000451239 222 ntBASIC5.04□□□□□ -1.6
CIITAP33076 CDY23P-201ENST00000451661 1014 ntBASIC5.04□□□□□ -1.6
CIITAP33076 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.04□□□□□ -1.6
CIITAP33076 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.04□□□□□ -1.6
CIITAP33076 PTGES3P5-201ENST00000455109 434 ntBASIC5.04□□□□□ -1.6
CIITAP33076 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.04□□□□□ -1.6
CIITAP33076 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CIITAP33076 RN7SL481P-201ENST00000477764 299 ntBASIC5.04□□□□□ -1.6
CIITAP33076 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CIITAP33076 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.04□□□□□ -1.6
CIITAP33076 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.04□□□□□ -1.6
CIITAP33076 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.04□□□□□ -1.6
CIITAP33076 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.04□□□□□ -1.6
CIITAP33076 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CIITAP33076 GSTP1P1-201ENST00000548078 319 ntBASIC5.04□□□□□ -1.6
CIITAP33076 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.04□□□□□ -1.6
CIITAP33076 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.04□□□□□ -1.6
CIITAP33076 MIR4284-201ENST00000578924 81 ntBASIC5.04□□□□□ -1.6
CIITAP33076 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.04□□□□□ -1.6
CIITAP33076 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.04□□□□□ -1.6
CIITAP33076 PSMA6P4-201ENST00000603247 718 ntBASIC5.04□□□□□ -1.6
CIITAP33076 AP002906.1-201ENST00000603405 233 ntBASIC5.04□□□□□ -1.6
CIITAP33076 DUXAP3-201ENST00000603616 594 ntBASIC5.04□□□□□ -1.6
CIITAP33076 AL035411.2-201ENST00000604022 421 ntBASIC5.04□□□□□ -1.6
CIITAP33076 AC010201.1-201ENST00000605051 540 ntBASIC5.04□□□□□ -1.6
CIITAP33076 AC092106.3-201ENST00000611308 722 ntBASIC5.04□□□□□ -1.6
CIITAP33076 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CIITAP33076 MIR7973-1-201ENST00000614683 76 ntBASIC5.04□□□□□ -1.6
CIITAP33076 AL121873.1-201ENST00000616013 524 ntBASIC5.04□□□□□ -1.6
CIITAP33076 AL121895.2-201ENST00000619558 447 ntBASIC5.04□□□□□ -1.6
CIITAP33076 AC123767.1-202ENST00000620407 817 ntBASIC5.04□□□□□ -1.6
CIITAP33076 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CIITAP33076 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
CIITAP33076 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CIITAP33076 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CIITAP33076 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CIITAP33076 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CIITAP33076 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CIITAP33076 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.03□□□□□ -1.6
CIITAP33076 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CIITAP33076 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CIITAP33076 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.03□□□□□ -1.6
CIITAP33076 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CIITAP33076 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms