Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PDGFRAP16234 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFRAP16234 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFRAP16234 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFRAP16234 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.54□□□□□ -1.68
PDGFRAP16234 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFRAP16234 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PDGFRAP16234 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PDGFRAP16234 SNORA63.3-201ENST00000362682 132 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 SNORD66.1-201ENST00000391230 76 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFRAP16234 AP002784.2-201ENST00000397300 549 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 VN1R8P-201ENST00000407739 893 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 RNU2-65P-201ENST00000410162 185 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 RAB28P1-201ENST00000411517 641 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFRAP16234 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 CYCSP10-201ENST00000417973 294 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFRAP16234 RPS29P17-201ENST00000430795 166 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.54□□□□□ -1.68
PDGFRAP16234 TPT1P12-201ENST00000448968 492 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDGFRAP16234 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFRAP16234 RPL7P32-201ENST00000457119 744 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 RN7SL98P-201ENST00000462271 300 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 RN7SL810P-201ENST00000493031 276 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 PPM1AP1-201ENST00000502740 1135 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.54□□□□□ -1.68
PDGFRAP16234 HMGN1P15-201ENST00000513870 295 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFRAP16234 AC134698.5-201ENST00000519444 336 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 IGLV3-26-201ENST00000520756 302 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 PHBP17-201ENST00000528576 541 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 OR4U1P-201ENST00000554958 912 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.54□□□□□ -1.68
PDGFRAP16234 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFRAP16234 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFRAP16234 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFRAP16234 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.54□□□□□ -1.68
PDGFRAP16234 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.54□□□□□ -1.68
PDGFRAP16234 NTAN1P1-201ENST00000603150 646 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.54□□□□□ -1.68
PDGFRAP16234 MLECP1-201ENST00000615893 709 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 AC019278.1-201ENST00000623516 479 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PDGFRAP16234 AC018529.3-201ENST00000624212 2254 ntBASIC4.54□□□□□ -1.68
PDGFRAP16234 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PDGFRAP16234 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PDGFRAP16234 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFRAP16234 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
PDGFRAP16234 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFRAP16234 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFRAP16234 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.53□□□□□ -1.68
PDGFRAP16234 EIF1P3-201ENST00000423841 334 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 OR5AW1P-201ENST00000426334 1006 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFRAP16234 RPS3AP54-201ENST00000435535 734 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFRAP16234 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFRAP16234 RPL23AP52-201ENST00000439311 478 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFRAP16234 ABCF2P2-201ENST00000450549 296 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFRAP16234 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.53□□□□□ -1.68
PDGFRAP16234 AL645939.1-201ENST00000453429 797 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 RPS23P7-201ENST00000466210 444 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 AC015908.1-201ENST00000478739 476 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFRAP16234 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFRAP16234 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.53□□□□□ -1.68
PDGFRAP16234 AC010306.1-201ENST00000523223 1117 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFRAP16234 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFRAP16234 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.53□□□□□ -1.68
PDGFRAP16234 AC023575.1-201ENST00000580510 358 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFRAP16234 AL354984.3-201ENST00000604803 325 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 MIR6798-201ENST00000612887 67 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFRAP16234 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 AC093875.1-201ENST00000623688 504 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 AP003400.6-201ENST00000624698 740 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 AC080188.3-201ENST00000624842 748 ntBASIC4.53□□□□□ -1.68
PDGFRAP16234 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.53□□□□□ -1.68
PDGFRAP16234 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFRAP16234 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PDGFRAP16234 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFRAP16234 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFRAP16234 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFRAP16234 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFRAP16234 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDGFRAP16234 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDGFRAP16234 OR11H5P-202ENST00000641612 1325 ntBASIC4.52□□□□□ -1.69
PDGFRAP16234 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.52□□□□□ -1.69
PDGFRAP16234 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PDGFRAP16234 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDGFRAP16234 RN7SKP44-201ENST00000363602 316 ntBASIC4.52□□□□□ -1.69
PDGFRAP16234 OR52E6-202ENST00000379946 954 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms