Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 HSP90AA4P-202ENST00000506915 2228 ntBASIC6.12□□□□□ -1.43
CFTRP13569 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CFTRP13569 AL357075.1-201ENST00000404107 726 ntBASIC6.12□□□□□ -1.43
CFTRP13569 HDGFP1-201ENST00000405943 252 ntBASIC6.12□□□□□ -1.43
CFTRP13569 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC6.12□□□□□ -1.43
CFTRP13569 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CFTRP13569 UBA52P3-201ENST00000491303 382 ntBASIC6.12□□□□□ -1.43
CFTRP13569 FTH1P24-201ENST00000503502 462 ntBASIC6.12□□□□□ -1.43
CFTRP13569 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.12□□□□□ -1.43
CFTRP13569 IGKV2-26-201ENST00000518305 343 ntBASIC6.12□□□□□ -1.43
CFTRP13569 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.12□□□□□ -1.43
CFTRP13569 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.12□□□□□ -1.43
CFTRP13569 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.12□□□□□ -1.43
CFTRP13569 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CFTRP13569 U4.6-201ENST00000621618 127 ntBASIC6.12□□□□□ -1.43
CFTRP13569 OR5AC4P-202ENST00000642086 985 ntBASIC6.12□□□□□ -1.43
CFTRP13569 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
CFTRP13569 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CFTRP13569 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC6.12□□□□□ -1.43
CFTRP13569 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CFTRP13569 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CFTRP13569 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.11□□□□□ -1.43
CFTRP13569 GSTA8P-201ENST00000404253 637 ntBASIC6.11□□□□□ -1.43
CFTRP13569 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC6.11□□□□□ -1.43
CFTRP13569 HMGB3P20-201ENST00000417997 600 ntBASIC6.11□□□□□ -1.43
CFTRP13569 OR1AA1P-201ENST00000419597 916 ntBASIC6.11□□□□□ -1.43
CFTRP13569 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.11□□□□□ -1.43
CFTRP13569 NDUFB1P1-201ENST00000435191 180 ntBASIC6.11□□□□□ -1.43
CFTRP13569 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.11□□□□□ -1.43
CFTRP13569 RNA5SP103-201ENST00000459503 118 ntBASIC6.11□□□□□ -1.43
CFTRP13569 STMN1P2-201ENST00000508435 439 ntBASIC6.11□□□□□ -1.43
CFTRP13569 RNU6-579P-201ENST00000516879 102 ntBASIC6.11□□□□□ -1.43
CFTRP13569 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.11□□□□□ -1.43
CFTRP13569 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CFTRP13569 LARP7P3-201ENST00000579888 337 ntBASIC6.11□□□□□ -1.43
CFTRP13569 AP003355.3-201ENST00000623465 114 ntBASIC6.11□□□□□ -1.43
CFTRP13569 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CFTRP13569 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
CFTRP13569 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CFTRP13569 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC6.11□□□□□ -1.43
CFTRP13569 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CFTRP13569 AC120036.2-201ENST00000509729 1474 ntBASIC6.1□□□□□ -1.43
CFTRP13569 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.1□□□□□ -1.43
CFTRP13569 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CFTRP13569 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC6.1□□□□□ -1.43
CFTRP13569 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC6.1□□□□□ -1.43
CFTRP13569 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.1□□□□□ -1.43
CFTRP13569 PPBPP1-201ENST00000510807 373 ntBASIC6.1□□□□□ -1.43
CFTRP13569 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC6.1□□□□□ -1.43
CFTRP13569 Vault.1-201ENST00000516474 102 ntBASIC6.1□□□□□ -1.43
CFTRP13569 AC027281.1-201ENST00000574178 758 ntBASIC6.1□□□□□ -1.43
CFTRP13569 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CFTRP13569 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.1□□□□□ -1.43
CFTRP13569 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC6.1□□□□□ -1.43
CFTRP13569 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CFTRP13569 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CFTRP13569 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CFTRP13569 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CFTRP13569 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CFTRP13569 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CFTRP13569 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.09□□□□□ -1.43
CFTRP13569 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.09□□□□□ -1.43
CFTRP13569 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.09□□□□□ -1.43
CFTRP13569 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.09□□□□□ -1.43
CFTRP13569 AC109458.1-201ENST00000508858 316 ntBASIC6.09□□□□□ -1.43
CFTRP13569 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC6.09□□□□□ -1.43
CFTRP13569 AC023141.12-201ENST00000512399 199 ntBASIC6.09□□□□□ -1.43
CFTRP13569 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.09□□□□□ -1.43
CFTRP13569 AL163642.2-201ENST00000604722 1019 ntBASIC6.09□□□□□ -1.43
CFTRP13569 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC6.09□□□□□ -1.43
CFTRP13569 AC026422.1-201ENST00000623961 452 ntBASIC6.09□□□□□ -1.43
CFTRP13569 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.09□□□□□ -1.43
CFTRP13569 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CFTRP13569 AC092435.3-201ENST00000565538 3654 ntBASIC6.09□□□□□ -1.43
CFTRP13569 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CFTRP13569 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CFTRP13569 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.09□□□□□ -1.43
CFTRP13569 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.09□□□□□ -1.43
CFTRP13569 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.09□□□□□ -1.43
CFTRP13569 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
CFTRP13569 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
CFTRP13569 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CFTRP13569 TAF9BP1-201ENST00000396646 746 ntBASIC6.09□□□□□ -1.44
CFTRP13569 MTHFD2P2-201ENST00000407725 247 ntBASIC6.09□□□□□ -1.44
CFTRP13569 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.09□□□□□ -1.44
CFTRP13569 RNF19BPX-201ENST00000426224 625 ntBASIC6.09□□□□□ -1.44
CFTRP13569 RN7SL429P-201ENST00000479090 223 ntBASIC6.09□□□□□ -1.44
CFTRP13569 RN7SL489P-201ENST00000486185 223 ntBASIC6.09□□□□□ -1.44
CFTRP13569 RN7SL327P-201ENST00000488659 223 ntBASIC6.09□□□□□ -1.44
CFTRP13569 RNU4ATAC17P-201ENST00000517272 120 ntBASIC6.09□□□□□ -1.44
CFTRP13569 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.09□□□□□ -1.44
CFTRP13569 MTND6P33-201ENST00000571794 183 ntBASIC6.09□□□□□ -1.44
CFTRP13569 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.09□□□□□ -1.44
CFTRP13569 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.09□□□□□ -1.44
CFTRP13569 RN7SL853P-201ENST00000617250 223 ntBASIC6.09□□□□□ -1.44
CFTRP13569 AC127502.3-201ENST00000636170 1206 ntBASIC6.09□□□□□ -1.44
CFTRP13569 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
CFTRP13569 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CFTRP13569 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.08□□□□□ -1.44
CFTRP13569 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms