Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PCNAP12004 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.61□□□□□ -1.67
PCNAP12004 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCNAP12004 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
PCNAP12004 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCNAP12004 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCNAP12004 snoZ40.1-201ENST00000364540 72 ntBASIC4.61□□□□□ -1.67
PCNAP12004 RNU6-707P-201ENST00000364647 95 ntBASIC4.61□□□□□ -1.67
PCNAP12004 RNU4-28P-201ENST00000364739 141 ntBASIC4.61□□□□□ -1.67
PCNAP12004 OR52E6-202ENST00000379946 954 ntBASIC4.61□□□□□ -1.67
PCNAP12004 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.61□□□□□ -1.67
PCNAP12004 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.61□□□□□ -1.67
PCNAP12004 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.61□□□□□ -1.67
PCNAP12004 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.61□□□□□ -1.67
PCNAP12004 MTND2P16-201ENST00000419987 799 ntBASIC4.61□□□□□ -1.67
PCNAP12004 OR2AM1P-201ENST00000422137 422 ntBASIC4.61□□□□□ -1.67
PCNAP12004 FABP7P1-201ENST00000424004 391 ntBASIC4.61□□□□□ -1.67
PCNAP12004 RPL21P43-201ENST00000425440 472 ntBASIC4.61□□□□□ -1.67
PCNAP12004 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.61□□□□□ -1.67
PCNAP12004 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCNAP12004 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.61□□□□□ -1.67
PCNAP12004 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.61□□□□□ -1.67
PCNAP12004 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.61□□□□□ -1.67
PCNAP12004 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.61□□□□□ -1.67
PCNAP12004 RPL21P110-201ENST00000433345 446 ntBASIC4.61□□□□□ -1.67
PCNAP12004 AC084290.1-201ENST00000434995 374 ntBASIC4.61□□□□□ -1.67
PCNAP12004 NMNAT1P2-201ENST00000435192 860 ntBASIC4.61□□□□□ -1.67
PCNAP12004 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCNAP12004 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.61□□□□□ -1.67
PCNAP12004 RPS27P23-201ENST00000487608 251 ntBASIC4.61□□□□□ -1.67
PCNAP12004 STMN1P2-201ENST00000508435 439 ntBASIC4.61□□□□□ -1.67
PCNAP12004 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.61□□□□□ -1.67
PCNAP12004 AC010285.3-201ENST00000511668 676 ntBASIC4.61□□□□□ -1.67
PCNAP12004 COX6B1P6-201ENST00000522347 255 ntBASIC4.61□□□□□ -1.67
PCNAP12004 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.61□□□□□ -1.67
PCNAP12004 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.61□□□□□ -1.67
PCNAP12004 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.61□□□□□ -1.67
PCNAP12004 DEFB109D-201ENST00000529497 240 ntBASIC4.61□□□□□ -1.67
PCNAP12004 AC090312.2-201ENST00000582687 378 ntBASIC4.61□□□□□ -1.67
PCNAP12004 OR7E18P-201ENST00000592589 702 ntBASIC4.61□□□□□ -1.67
PCNAP12004 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.61□□□□□ -1.67
PCNAP12004 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.61□□□□□ -1.67
PCNAP12004 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.61□□□□□ -1.67
PCNAP12004 VN1R78P-201ENST00000597393 564 ntBASIC4.61□□□□□ -1.67
PCNAP12004 PSMA6P4-201ENST00000603247 718 ntBASIC4.61□□□□□ -1.67
PCNAP12004 ELOCP35-201ENST00000604289 336 ntBASIC4.61□□□□□ -1.67
PCNAP12004 AC016877.3-201ENST00000606778 504 ntBASIC4.61□□□□□ -1.67
PCNAP12004 AC007349.4-201ENST00000608114 532 ntBASIC4.61□□□□□ -1.67
PCNAP12004 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.61□□□□□ -1.67
PCNAP12004 AC007497.1-201ENST00000610421 561 ntBASIC4.61□□□□□ -1.67
PCNAP12004 FAM27B-201ENST00000610601 213 ntBASIC4.61□□□□□ -1.67
PCNAP12004 AL592148.2-201ENST00000612210 372 ntBASIC4.61□□□□□ -1.67
PCNAP12004 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCNAP12004 AC067852.7-201ENST00000623270 535 ntBASIC4.61□□□□□ -1.67
PCNAP12004 AC109454.4-201ENST00000623411 649 ntBASIC4.61□□□□□ -1.67
PCNAP12004 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.61□□□□□ -1.67
PCNAP12004 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCNAP12004 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCNAP12004 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PCNAP12004 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCNAP12004 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCNAP12004 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCNAP12004 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.61□□□□□ -1.67
PCNAP12004 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCNAP12004 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.61□□□□□ -1.67
PCNAP12004 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCNAP12004 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCNAP12004 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCNAP12004 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCNAP12004 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCNAP12004 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PCNAP12004 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.6□□□□□ -1.67
PCNAP12004 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCNAP12004 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCNAP12004 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PCNAP12004 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCNAP12004 RN7SKP104-201ENST00000362605 328 ntBASIC4.6□□□□□ -1.67
PCNAP12004 RNU4-92P-201ENST00000363783 136 ntBASIC4.6□□□□□ -1.67
PCNAP12004 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.6□□□□□ -1.67
PCNAP12004 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCNAP12004 SNORD96B-201ENST00000386148 79 ntBASIC4.6□□□□□ -1.67
PCNAP12004 RNU1-82P-201ENST00000390851 165 ntBASIC4.6□□□□□ -1.67
PCNAP12004 U3.30-201ENST00000391308 210 ntBASIC4.6□□□□□ -1.67
PCNAP12004 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
PCNAP12004 AL589647.1-201ENST00000402485 466 ntBASIC4.6□□□□□ -1.67
PCNAP12004 AL080315.1-201ENST00000406055 466 ntBASIC4.6□□□□□ -1.67
PCNAP12004 AC114755.2-201ENST00000413520 361 ntBASIC4.6□□□□□ -1.67
PCNAP12004 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.6□□□□□ -1.67
PCNAP12004 RPS24P7-201ENST00000416921 246 ntBASIC4.6□□□□□ -1.67
PCNAP12004 LINC00993-201ENST00000420453 540 ntBASIC4.6□□□□□ -1.67
PCNAP12004 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.6□□□□□ -1.67
PCNAP12004 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.6□□□□□ -1.67
PCNAP12004 RPL12P28-201ENST00000430852 489 ntBASIC4.6□□□□□ -1.67
PCNAP12004 CETN4P-201ENST00000432407 469 ntBASIC4.6□□□□□ -1.67
PCNAP12004 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.6□□□□□ -1.67
PCNAP12004 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.6□□□□□ -1.67
PCNAP12004 AC104306.1-201ENST00000449702 371 ntBASIC4.6□□□□□ -1.67
PCNAP12004 TPMTP4-201ENST00000450749 678 ntBASIC4.6□□□□□ -1.67
PCNAP12004 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.6□□□□□ -1.67
PCNAP12004 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms