Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC017002.4-201ENST00000604721 1525 ntBASIC3.19□□□□□ -1.9
CD28P10747 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CD28P10747 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD28P10747 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.19□□□□□ -1.9
CD28P10747 RNU6-666P-201ENST00000363499 107 ntBASIC3.19□□□□□ -1.9
CD28P10747 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CD28P10747 MIR708-201ENST00000390708 88 ntBASIC3.19□□□□□ -1.9
CD28P10747 RNU6ATAC-201ENST00000408749 126 ntBASIC3.19□□□□□ -1.9
CD28P10747 RNA5SP104-201ENST00000410989 118 ntBASIC3.19□□□□□ -1.9
CD28P10747 SKP1P3-201ENST00000429280 487 ntBASIC3.19□□□□□ -1.9
CD28P10747 RSL24D1P2-201ENST00000445584 366 ntBASIC3.19□□□□□ -1.9
CD28P10747 AP002345.1-201ENST00000456493 928 ntBASIC3.19□□□□□ -1.9
CD28P10747 RPL7P1-201ENST00000468161 747 ntBASIC3.19□□□□□ -1.9
CD28P10747 RPL7P9-201ENST00000468715 747 ntBASIC3.19□□□□□ -1.9
CD28P10747 RPS4XP15-201ENST00000489210 795 ntBASIC3.19□□□□□ -1.9
CD28P10747 AC108145.1-201ENST00000503770 153 ntBASIC3.19□□□□□ -1.9
CD28P10747 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.19□□□□□ -1.9
CD28P10747 RNU6-760P-201ENST00000516078 97 ntBASIC3.19□□□□□ -1.9
CD28P10747 PHBP17-201ENST00000528576 541 ntBASIC3.19□□□□□ -1.9
CD28P10747 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CD28P10747 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.19□□□□□ -1.9
CD28P10747 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.19□□□□□ -1.9
CD28P10747 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.19□□□□□ -1.9
CD28P10747 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CD28P10747 HSPE1P5-201ENST00000561489 272 ntBASIC3.19□□□□□ -1.9
CD28P10747 MIR5685-201ENST00000579080 79 ntBASIC3.19□□□□□ -1.9
CD28P10747 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.19□□□□□ -1.9
CD28P10747 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.19□□□□□ -1.9
CD28P10747 AC005255.1-201ENST00000593748 216 ntBASIC3.19□□□□□ -1.9
CD28P10747 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.19□□□□□ -1.9
CD28P10747 AC090912.3-201ENST00000609775 533 ntBASIC3.19□□□□□ -1.9
CD28P10747 AC011472.4-201ENST00000615848 491 ntBASIC3.19□□□□□ -1.9
CD28P10747 AC007342.8-201ENST00000623278 678 ntBASIC3.19□□□□□ -1.9
CD28P10747 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.19□□□□□ -1.9
CD28P10747 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD28P10747 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD28P10747 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CD28P10747 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CD28P10747 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CD28P10747 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CD28P10747 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.19□□□□□ -1.9
CD28P10747 AL359715.4-201ENST00000606629 1436 ntBASIC3.19□□□□□ -1.9
CD28P10747 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.19□□□□□ -1.9
CD28P10747 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CD28P10747 AC011266.1-201ENST00000624119 3569 ntBASIC3.18□□□□□ -1.9
CD28P10747 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CD28P10747 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD28P10747 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CD28P10747 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD28P10747 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD28P10747 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CD28P10747 AC006042.3-201ENST00000454684 1469 ntBASIC3.18□□□□□ -1.9
CD28P10747 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD28P10747 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD28P10747 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD28P10747 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CD28P10747 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CD28P10747 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
CD28P10747 RNA5SP52-201ENST00000362448 134 ntBASIC3.18□□□□□ -1.9
CD28P10747 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.18□□□□□ -1.9
CD28P10747 GCNT6-201ENST00000379591 934 ntBASIC3.18□□□□□ -1.9
CD28P10747 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CD28P10747 RNA5SP171-201ENST00000391071 115 ntBASIC3.18□□□□□ -1.9
CD28P10747 PTMAP2-201ENST00000397627 327 ntBASIC3.18□□□□□ -1.9
CD28P10747 RPL23AP48-201ENST00000406913 488 ntBASIC3.18□□□□□ -1.9
CD28P10747 VN1R8P-201ENST00000407739 893 ntBASIC3.18□□□□□ -1.9
CD28P10747 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.18□□□□□ -1.9
CD28P10747 RPS23P10-201ENST00000416185 486 ntBASIC3.18□□□□□ -1.9
CD28P10747 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.18□□□□□ -1.9
CD28P10747 DPY19L1P2-201ENST00000426647 915 ntBASIC3.18□□□□□ -1.9
CD28P10747 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CD28P10747 AL445584.1-201ENST00000431451 330 ntBASIC3.18□□□□□ -1.9
CD28P10747 AC007389.2-201ENST00000434630 306 ntBASIC3.18□□□□□ -1.9
CD28P10747 RPL12P46-201ENST00000436610 195 ntBASIC3.18□□□□□ -1.9
CD28P10747 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.18□□□□□ -1.9
CD28P10747 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.18□□□□□ -1.9
CD28P10747 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.18□□□□□ -1.9
CD28P10747 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.18□□□□□ -1.9
CD28P10747 AC034236.1-201ENST00000469891 373 ntBASIC3.18□□□□□ -1.9
CD28P10747 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.18□□□□□ -1.9
CD28P10747 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.18□□□□□ -1.9
CD28P10747 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.18□□□□□ -1.9
CD28P10747 AC025445.1-201ENST00000502728 300 ntBASIC3.18□□□□□ -1.9
CD28P10747 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CD28P10747 AC006499.6-201ENST00000511169 607 ntBASIC3.18□□□□□ -1.9
CD28P10747 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.18□□□□□ -1.9
CD28P10747 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.18□□□□□ -1.9
CD28P10747 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.18□□□□□ -1.9
CD28P10747 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CD28P10747 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.18□□□□□ -1.9
CD28P10747 AC063950.1-201ENST00000552036 308 ntBASIC3.18□□□□□ -1.9
CD28P10747 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.18□□□□□ -1.9
CD28P10747 AC012414.2-201ENST00000559474 187 ntBASIC3.18□□□□□ -1.9
CD28P10747 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.18□□□□□ -1.9
CD28P10747 CYP4A43P-201ENST00000568156 121 ntBASIC3.18□□□□□ -1.9
CD28P10747 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.18□□□□□ -1.9
CD28P10747 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.18□□□□□ -1.9
CD28P10747 AC107982.3-201ENST00000584957 985 ntBASIC3.18□□□□□ -1.9
CD28P10747 BNIP3P22-201ENST00000593399 556 ntBASIC3.18□□□□□ -1.9
CD28P10747 PSMA6P4-201ENST00000603247 718 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms