Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC096638.2-201ENST00000434965 711 ntBASIC4.1□□□□□ -1.75
APOEP02649 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.1□□□□□ -1.75
APOEP02649 YWHAQP9-201ENST00000445891 512 ntBASIC4.1□□□□□ -1.75
APOEP02649 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
APOEP02649 RN7SL132P-201ENST00000478131 296 ntBASIC4.1□□□□□ -1.75
APOEP02649 RPS3AP6-201ENST00000484430 795 ntBASIC4.1□□□□□ -1.75
APOEP02649 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.1□□□□□ -1.75
APOEP02649 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.1□□□□□ -1.75
APOEP02649 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.1□□□□□ -1.75
APOEP02649 SNORA70.14-201ENST00000516205 110 ntBASIC4.1□□□□□ -1.75
APOEP02649 SNORA26.10-201ENST00000516427 141 ntBASIC4.1□□□□□ -1.75
APOEP02649 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
APOEP02649 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.1□□□□□ -1.75
APOEP02649 MRPS35P3-201ENST00000603189 709 ntBASIC4.1□□□□□ -1.75
APOEP02649 AC099676.1-201ENST00000608886 657 ntBASIC4.1□□□□□ -1.75
APOEP02649 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
APOEP02649 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
APOEP02649 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
APOEP02649 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.1□□□□□ -1.75
APOEP02649 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
APOEP02649 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.1□□□□□ -1.75
APOEP02649 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
APOEP02649 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
APOEP02649 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.09□□□□□ -1.75
APOEP02649 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
APOEP02649 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.09□□□□□ -1.75
APOEP02649 RN7SKP177-201ENST00000410567 355 ntBASIC4.09□□□□□ -1.75
APOEP02649 RNU6-233P-201ENST00000410845 141 ntBASIC4.09□□□□□ -1.75
APOEP02649 CASKP1-201ENST00000412870 582 ntBASIC4.09□□□□□ -1.75
APOEP02649 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.09□□□□□ -1.75
APOEP02649 ATP5HP2-201ENST00000433885 485 ntBASIC4.09□□□□□ -1.75
APOEP02649 HMGB1P37-201ENST00000439613 609 ntBASIC4.09□□□□□ -1.75
APOEP02649 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.09□□□□□ -1.75
APOEP02649 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.09□□□□□ -1.75
APOEP02649 VN1R96P-201ENST00000446052 858 ntBASIC4.09□□□□□ -1.75
APOEP02649 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.09□□□□□ -1.75
APOEP02649 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.09□□□□□ -1.75
APOEP02649 METTL15P1-201ENST00000481421 1045 ntBASIC4.09□□□□□ -1.75
APOEP02649 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.09□□□□□ -1.75
APOEP02649 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.09□□□□□ -1.75
APOEP02649 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.09□□□□□ -1.75
APOEP02649 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.09□□□□□ -1.75
APOEP02649 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.09□□□□□ -1.75
APOEP02649 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.09□□□□□ -1.75
APOEP02649 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.09□□□□□ -1.75
APOEP02649 BNIP3P5-201ENST00000562290 498 ntBASIC4.09□□□□□ -1.75
APOEP02649 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.09□□□□□ -1.75
APOEP02649 SNX6P1-201ENST00000601728 1224 ntBASIC4.09□□□□□ -1.75
APOEP02649 GMCL1P2-201ENST00000605230 823 ntBASIC4.09□□□□□ -1.75
APOEP02649 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.09□□□□□ -1.75
APOEP02649 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
APOEP02649 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
APOEP02649 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
APOEP02649 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.08□□□□□ -1.76
APOEP02649 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
APOEP02649 IPO8P1-201ENST00000455509 3109 ntBASIC4.08□□□□□ -1.76
APOEP02649 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
APOEP02649 MAPK10-373ENST00000641983 6772 ntBASIC4.08□□□□□ -1.76
APOEP02649 MAPK10-372ENST00000641954 3413 ntBASIC4.08□□□□□ -1.76
APOEP02649 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.08□□□□□ -1.76
APOEP02649 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
APOEP02649 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.08□□□□□ -1.76
APOEP02649 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
APOEP02649 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
APOEP02649 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
APOEP02649 RN7SKP56-201ENST00000410513 331 ntBASIC4.08□□□□□ -1.76
APOEP02649 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.08□□□□□ -1.76
APOEP02649 RPL17P36-201ENST00000420302 549 ntBASIC4.08□□□□□ -1.76
APOEP02649 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.08□□□□□ -1.76
APOEP02649 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.08□□□□□ -1.76
APOEP02649 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.08□□□□□ -1.76
APOEP02649 RANP8-201ENST00000444720 713 ntBASIC4.08□□□□□ -1.76
APOEP02649 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.08□□□□□ -1.76
APOEP02649 FTH1P9-201ENST00000513251 355 ntBASIC4.08□□□□□ -1.76
APOEP02649 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.08□□□□□ -1.76
APOEP02649 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.08□□□□□ -1.76
APOEP02649 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
APOEP02649 OR4A12P-201ENST00000530847 918 ntBASIC4.08□□□□□ -1.76
APOEP02649 YPEL5P3-201ENST00000547227 352 ntBASIC4.08□□□□□ -1.76
APOEP02649 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.08□□□□□ -1.76
APOEP02649 AC018552.3-201ENST00000567416 561 ntBASIC4.08□□□□□ -1.76
APOEP02649 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.08□□□□□ -1.76
APOEP02649 AC090912.3-201ENST00000609775 533 ntBASIC4.08□□□□□ -1.76
APOEP02649 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.08□□□□□ -1.76
APOEP02649 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.08□□□□□ -1.76
APOEP02649 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.08□□□□□ -1.76
APOEP02649 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
APOEP02649 AL445437.1-201ENST00000623157 3087 ntBASIC4.08□□□□□ -1.76
APOEP02649 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
APOEP02649 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
APOEP02649 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
APOEP02649 CYP1D1P-201ENST00000416662 1433 ntBASIC4.07□□□□□ -1.76
APOEP02649 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
APOEP02649 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
APOEP02649 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
APOEP02649 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.07□□□□□ -1.76
APOEP02649 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
APOEP02649 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.07□□□□□ -1.76
APOEP02649 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.07□□□□□ -1.76
APOEP02649 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms