Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.46□□□□□ -1.7
COL1A1P02452 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
COL1A1P02452 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.46□□□□□ -1.7
COL1A1P02452 RN7SL371P-201ENST00000578099 267 ntBASIC4.46□□□□□ -1.7
COL1A1P02452 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
COL1A1P02452 AC005000.2-201ENST00000605468 310 ntBASIC4.46□□□□□ -1.7
COL1A1P02452 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.46□□□□□ -1.7
COL1A1P02452 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.46□□□□□ -1.7
COL1A1P02452 OR5AC4P-202ENST00000642086 985 ntBASIC4.46□□□□□ -1.7
COL1A1P02452 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL1A1P02452 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL1A1P02452 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.46□□□□□ -1.7
COL1A1P02452 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.46□□□□□ -1.7
COL1A1P02452 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.46□□□□□ -1.7
COL1A1P02452 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
COL1A1P02452 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
COL1A1P02452 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.45□□□□□ -1.7
COL1A1P02452 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL1A1P02452 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
COL1A1P02452 BDP1P-201ENST00000582658 1990 ntBASIC4.45□□□□□ -1.7
COL1A1P02452 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL1A1P02452 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL1A1P02452 AC096638.2-201ENST00000434965 711 ntBASIC4.45□□□□□ -1.7
COL1A1P02452 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.45□□□□□ -1.7
COL1A1P02452 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.45□□□□□ -1.7
COL1A1P02452 RPL32P34-201ENST00000486380 400 ntBASIC4.45□□□□□ -1.7
COL1A1P02452 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.45□□□□□ -1.7
COL1A1P02452 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.45□□□□□ -1.7
COL1A1P02452 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL1A1P02452 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.45□□□□□ -1.7
COL1A1P02452 MIR4433B-201ENST00000581329 102 ntBASIC4.45□□□□□ -1.7
COL1A1P02452 AL355365.1-201ENST00000616480 294 ntBASIC4.45□□□□□ -1.7
COL1A1P02452 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.45□□□□□ -1.7
COL1A1P02452 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
COL1A1P02452 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
COL1A1P02452 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL1A1P02452 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL1A1P02452 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.44□□□□□ -1.7
COL1A1P02452 AC026784.1-201ENST00000507986 352 ntBASIC4.44□□□□□ -1.7
COL1A1P02452 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.44□□□□□ -1.7
COL1A1P02452 GTF2IP8-201ENST00000560687 584 ntBASIC4.44□□□□□ -1.7
COL1A1P02452 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.44□□□□□ -1.7
COL1A1P02452 AC009237.17-201ENST00000618111 748 ntBASIC4.44□□□□□ -1.7
COL1A1P02452 AC074276.2-201ENST00000619891 348 ntBASIC4.44□□□□□ -1.7
COL1A1P02452 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL1A1P02452 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.44□□□□□ -1.7
COL1A1P02452 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL1A1P02452 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.44□□□□□ -1.7
COL1A1P02452 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.44□□□□□ -1.7
COL1A1P02452 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.44□□□□□ -1.7
COL1A1P02452 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.44□□□□□ -1.7
COL1A1P02452 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL1A1P02452 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.44□□□□□ -1.7
COL1A1P02452 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL1A1P02452 AL121834.1-202ENST00000404494 277 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 JKAMPP1-201ENST00000413804 919 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 AC017079.2-201ENST00000416102 485 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 NANOGP6-201ENST00000429190 847 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.43□□□□□ -1.7
COL1A1P02452 RPL21P110-201ENST00000433345 446 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 RPSAP41-201ENST00000439695 860 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.43□□□□□ -1.7
COL1A1P02452 AC109458.1-201ENST00000508858 316 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 HNRNPKP5-201ENST00000515300 253 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.43□□□□□ -1.7
COL1A1P02452 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.43□□□□□ -1.7
COL1A1P02452 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.43□□□□□ -1.7
COL1A1P02452 AC023161.2-201ENST00000551218 780 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.43□□□□□ -1.7
COL1A1P02452 DPRXP4-201ENST00000578053 568 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 AL133247.2-201ENST00000603236 482 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.43□□□□□ -1.7
COL1A1P02452 AL078595.2-201ENST00000605309 1780 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.43□□□□□ -1.7
COL1A1P02452 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL1A1P02452 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.43□□□□□ -1.7
COL1A1P02452 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL1A1P02452 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.43□□□□□ -1.7
COL1A1P02452 USP8P1-201ENST00000494673 3183 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 AL355596.1-201ENST00000565399 3996 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COL1A1P02452 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.43□□□□□ -1.7
COL1A1P02452 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.43□□□□□ -1.7
COL1A1P02452 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.43□□□□□ -1.7
COL1A1P02452 AC115115.1-201ENST00000449927 248 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.43□□□□□ -1.7
COL1A1P02452 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.43□□□□□ -1.7
COL1A1P02452 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.43□□□□□ -1.7
COL1A1P02452 SULT1C2P2-201ENST00000562517 294 ntBASIC4.43□□□□□ -1.7
COL1A1P02452 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.43□□□□□ -1.7
COL1A1P02452 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.43□□□□□ -1.7
COL1A1P02452 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.43□□□□□ -1.7
COL1A1P02452 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.43□□□□□ -1.7
COL1A1P02452 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.43□□□□□ -1.7
COL1A1P02452 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL1A1P02452 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL1A1P02452 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
COL1A1P02452 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms