Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RNF40O75150 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
RNF40O75150 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RNF40O75150 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RNF40O75150 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF40O75150 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF40O75150 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RNF40O75150 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
RNF40O75150 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF40O75150 RNU4-7P-201ENST00000364758 141 ntBASIC7.37□□□□□ -1.23
RNF40O75150 RNU1-115P-201ENST00000365329 160 ntBASIC7.37□□□□□ -1.23
RNF40O75150 RNU6-746P-201ENST00000384112 109 ntBASIC7.37□□□□□ -1.23
RNF40O75150 Y_RNA.515-201ENST00000384535 112 ntBASIC7.37□□□□□ -1.23
RNF40O75150 RNU6-823P-201ENST00000391042 103 ntBASIC7.37□□□□□ -1.23
RNF40O75150 LDHAP5-201ENST00000394996 622 ntBASIC7.37□□□□□ -1.23
RNF40O75150 RPS4XP9-201ENST00000405151 780 ntBASIC7.37□□□□□ -1.23
RNF40O75150 RNA5SP280-201ENST00000411230 115 ntBASIC7.37□□□□□ -1.23
RNF40O75150 AC092832.1-201ENST00000422934 400 ntBASIC7.37□□□□□ -1.23
RNF40O75150 AC233981.1-201ENST00000423224 461 ntBASIC7.37□□□□□ -1.23
RNF40O75150 RSL24D1P6-201ENST00000426934 401 ntBASIC7.37□□□□□ -1.23
RNF40O75150 PSMA6P3-201ENST00000428242 164 ntBASIC7.37□□□□□ -1.23
RNF40O75150 RPL21P91-201ENST00000429231 479 ntBASIC7.37□□□□□ -1.23
RNF40O75150 OR1H1P-201ENST00000448731 937 ntBASIC7.37□□□□□ -1.23
RNF40O75150 NDUFAF4P3-201ENST00000456468 525 ntBASIC7.37□□□□□ -1.23
RNF40O75150 AC026410.2-201ENST00000460281 156 ntBASIC7.37□□□□□ -1.23
RNF40O75150 AC044810.1-201ENST00000480271 711 ntBASIC7.37□□□□□ -1.23
RNF40O75150 AC058823.1-201ENST00000485315 474 ntBASIC7.37□□□□□ -1.23
RNF40O75150 RN7SL350P-201ENST00000492591 299 ntBASIC7.37□□□□□ -1.23
RNF40O75150 RNU6-1038P-201ENST00000516516 104 ntBASIC7.37□□□□□ -1.23
RNF40O75150 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.37□□□□□ -1.23
RNF40O75150 IGKV2D-10-201ENST00000520194 281 ntBASIC7.37□□□□□ -1.23
RNF40O75150 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.37□□□□□ -1.23
RNF40O75150 TRIM51DP-201ENST00000529746 596 ntBASIC7.37□□□□□ -1.23
RNF40O75150 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.37□□□□□ -1.23
RNF40O75150 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.37□□□□□ -1.23
RNF40O75150 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.37□□□□□ -1.23
RNF40O75150 AC015801.1-201ENST00000585651 153 ntBASIC7.37□□□□□ -1.23
RNF40O75150 AL157899.1-201ENST00000604110 936 ntBASIC7.37□□□□□ -1.23
RNF40O75150 AL121809.2-201ENST00000613169 341 ntBASIC7.37□□□□□ -1.23
RNF40O75150 AC145207.9-201ENST00000623802 325 ntBASIC7.37□□□□□ -1.23
RNF40O75150 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
RNF40O75150 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
RNF40O75150 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC7.37□□□□□ -1.23
RNF40O75150 AP002370.1-201ENST00000528055 1602 ntBASIC7.37□□□□□ -1.23
RNF40O75150 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF40O75150 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF40O75150 AC073365.1-203ENST00000641055 1992 ntBASIC7.37□□□□□ -1.23
RNF40O75150 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.37□□□□□ -1.23
RNF40O75150 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF40O75150 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF40O75150 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF40O75150 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 MTND5P7-201ENST00000413558 1798 ntBASIC7.36□□□□□ -1.23
RNF40O75150 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.36□□□□□ -1.23
RNF40O75150 USP9YP4-201ENST00000424401 1745 ntBASIC7.36□□□□□ -1.23
RNF40O75150 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
RNF40O75150 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
RNF40O75150 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RNF40O75150 RNA5SP333-201ENST00000363466 118 ntBASIC7.36□□□□□ -1.23
RNF40O75150 RNU6-853P-201ENST00000364306 107 ntBASIC7.36□□□□□ -1.23
RNF40O75150 RNU6-450P-201ENST00000364654 107 ntBASIC7.36□□□□□ -1.23
RNF40O75150 RNU6-593P-201ENST00000364716 112 ntBASIC7.36□□□□□ -1.23
RNF40O75150 RNA5SP334-201ENST00000364825 118 ntBASIC7.36□□□□□ -1.23
RNF40O75150 SNORD113-1-201ENST00000365321 69 ntBASIC7.36□□□□□ -1.23
RNF40O75150 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 MIR99A-201ENST00000384906 81 ntBASIC7.36□□□□□ -1.23
RNF40O75150 UBE2V1P2-201ENST00000397758 440 ntBASIC7.36□□□□□ -1.23
RNF40O75150 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF40O75150 RN7SKP108-201ENST00000411367 328 ntBASIC7.36□□□□□ -1.23
RNF40O75150 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF40O75150 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF40O75150 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF40O75150 AC139712.2-201ENST00000424302 339 ntBASIC7.36□□□□□ -1.23
RNF40O75150 COX6CP15-201ENST00000426313 211 ntBASIC7.36□□□□□ -1.23
RNF40O75150 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF40O75150 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF40O75150 AC012075.1-201ENST00000436549 580 ntBASIC7.36□□□□□ -1.23
RNF40O75150 RPL12P49-201ENST00000441100 121 ntBASIC7.36□□□□□ -1.23
RNF40O75150 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF40O75150 SNORD127-201ENST00000458892 86 ntBASIC7.36□□□□□ -1.23
RNF40O75150 RPL23AP12-201ENST00000467573 473 ntBASIC7.36□□□□□ -1.23
RNF40O75150 AL161747.1-201ENST00000480068 358 ntBASIC7.36□□□□□ -1.23
RNF40O75150 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF40O75150 AC090136.1-201ENST00000520009 240 ntBASIC7.36□□□□□ -1.23
RNF40O75150 AF279873.1-201ENST00000523393 313 ntBASIC7.36□□□□□ -1.23
RNF40O75150 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF40O75150 AC022080.3-201ENST00000544433 482 ntBASIC7.36□□□□□ -1.23
RNF40O75150 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF40O75150 MAGOH2P-202ENST00000584384 429 ntBASIC7.36□□□□□ -1.23
RNF40O75150 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF40O75150 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms