Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC007546.1-201ENST00000619452 559 ntBASIC4.19□□□□□ -1.74
SDC3O75056 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC3O75056 AC005086.4-201ENST00000623065 213 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AC000123.2-201ENST00000623124 461 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AC007546.2-201ENST00000623996 360 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AC020923.1-201ENST00000624021 917 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AC034229.5-201ENST00000624258 185 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AP003072.4-201ENST00000624580 310 ntBASIC4.19□□□□□ -1.74
SDC3O75056 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.19□□□□□ -1.74
SDC3O75056 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDC3O75056 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.19□□□□□ -1.74
SDC3O75056 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SDC3O75056 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDC3O75056 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SDC3O75056 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
SDC3O75056 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDC3O75056 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDC3O75056 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDC3O75056 DHX9P1-201ENST00000436565 3076 ntBASIC4.18□□□□□ -1.74
SDC3O75056 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDC3O75056 AC012020.1-201ENST00000624541 1728 ntBASIC4.18□□□□□ -1.74
SDC3O75056 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDC3O75056 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SDC3O75056 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.18□□□□□ -1.74
SDC3O75056 MIR448-201ENST00000362131 111 ntBASIC4.18□□□□□ -1.74
SDC3O75056 RNU1-20P-201ENST00000363314 162 ntBASIC4.18□□□□□ -1.74
SDC3O75056 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SDC3O75056 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDC3O75056 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.18□□□□□ -1.74
SDC3O75056 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
SDC3O75056 RNU11-4P-201ENST00000391149 133 ntBASIC4.18□□□□□ -1.74
SDC3O75056 AL590290.1-201ENST00000405336 380 ntBASIC4.18□□□□□ -1.74
SDC3O75056 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.18□□□□□ -1.74
SDC3O75056 MTCO3P4-201ENST00000419236 787 ntBASIC4.18□□□□□ -1.74
SDC3O75056 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.18□□□□□ -1.74
SDC3O75056 VN1R32P-201ENST00000452234 905 ntBASIC4.18□□□□□ -1.74
SDC3O75056 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.18□□□□□ -1.74
SDC3O75056 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.18□□□□□ -1.74
SDC3O75056 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.18□□□□□ -1.74
SDC3O75056 VWA8P1-201ENST00000510889 176 ntBASIC4.18□□□□□ -1.74
SDC3O75056 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.18□□□□□ -1.74
SDC3O75056 AL352979.3-201ENST00000553515 247 ntBASIC4.18□□□□□ -1.74
SDC3O75056 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.18□□□□□ -1.74
SDC3O75056 MIR4286-201ENST00000580651 93 ntBASIC4.18□□□□□ -1.74
SDC3O75056 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.18□□□□□ -1.74
SDC3O75056 AL671309.1-201ENST00000603750 544 ntBASIC4.18□□□□□ -1.74
SDC3O75056 AC245389.1-201ENST00000605141 529 ntBASIC4.18□□□□□ -1.74
SDC3O75056 AC015813.4-201ENST00000610469 179 ntBASIC4.18□□□□□ -1.74
SDC3O75056 FAM27D1-201ENST00000612308 341 ntBASIC4.18□□□□□ -1.74
SDC3O75056 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SDC3O75056 AL592437.2-201ENST00000421655 2434 ntBASIC4.18□□□□□ -1.74
SDC3O75056 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDC3O75056 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SDC3O75056 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDC3O75056 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.18□□□□□ -1.74
SDC3O75056 FAM91A3P-201ENST00000456826 2544 ntBASIC4.18□□□□□ -1.74
SDC3O75056 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SDC3O75056 AC006042.3-201ENST00000454684 1469 ntBASIC4.18□□□□□ -1.74
SDC3O75056 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SDC3O75056 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
SDC3O75056 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SDC3O75056 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SDC3O75056 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.17□□□□□ -1.74
SDC3O75056 AC108032.1-201ENST00000416706 207 ntBASIC4.17□□□□□ -1.74
SDC3O75056 AC062016.2-201ENST00000420950 676 ntBASIC4.17□□□□□ -1.74
SDC3O75056 AL389915.1-201ENST00000422463 466 ntBASIC4.17□□□□□ -1.74
SDC3O75056 AC073508.1-201ENST00000428866 656 ntBASIC4.17□□□□□ -1.74
SDC3O75056 CDY14P-201ENST00000431260 1014 ntBASIC4.17□□□□□ -1.74
SDC3O75056 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.17□□□□□ -1.74
SDC3O75056 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SDC3O75056 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.17□□□□□ -1.74
SDC3O75056 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.17□□□□□ -1.74
SDC3O75056 CDY12P-201ENST00000440679 1015 ntBASIC4.17□□□□□ -1.74
SDC3O75056 TPTE2P6-202ENST00000445572 1007 ntBASIC4.17□□□□□ -1.74
SDC3O75056 CDY13P-201ENST00000445813 1015 ntBASIC4.17□□□□□ -1.74
SDC3O75056 CDY23P-201ENST00000451661 1014 ntBASIC4.17□□□□□ -1.74
SDC3O75056 AL121877.1-201ENST00000453704 622 ntBASIC4.17□□□□□ -1.74
SDC3O75056 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.17□□□□□ -1.74
SDC3O75056 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SDC3O75056 MTND2P30-201ENST00000456663 382 ntBASIC4.17□□□□□ -1.74
SDC3O75056 VN1R105P-201ENST00000486595 910 ntBASIC4.17□□□□□ -1.74
SDC3O75056 AC023050.1-201ENST00000498198 304 ntBASIC4.17□□□□□ -1.74
SDC3O75056 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SDC3O75056 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.17□□□□□ -1.74
SDC3O75056 AC099522.1-202ENST00000514718 367 ntBASIC4.17□□□□□ -1.74
SDC3O75056 RNA5SP446-201ENST00000515955 82 ntBASIC4.17□□□□□ -1.74
SDC3O75056 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.17□□□□□ -1.74
SDC3O75056 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SDC3O75056 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.17□□□□□ -1.74
SDC3O75056 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.17□□□□□ -1.74
SDC3O75056 AC093014.1-201ENST00000548926 724 ntBASIC4.17□□□□□ -1.74
SDC3O75056 POLR2KP1-201ENST00000553226 168 ntBASIC4.17□□□□□ -1.74
SDC3O75056 AC106785.3-201ENST00000564064 847 ntBASIC4.17□□□□□ -1.74
SDC3O75056 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.17□□□□□ -1.74
SDC3O75056 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.17□□□□□ -1.74
SDC3O75056 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.17□□□□□ -1.74
SDC3O75056 AP002360.3-201ENST00000607673 710 ntBASIC4.17□□□□□ -1.74
SDC3O75056 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.17□□□□□ -1.74
SDC3O75056 U6.48-201ENST00000618523 106 ntBASIC4.17□□□□□ -1.74
SDC3O75056 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms