Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.78□□□□□ -1.81
SCN2BO60939 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN2BO60939 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN2BO60939 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN2BO60939 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN2BO60939 MIR383-201ENST00000362257 73 ntBASIC3.77□□□□□ -1.81
SCN2BO60939 RNU6-618P-201ENST00000363518 112 ntBASIC3.77□□□□□ -1.81
SCN2BO60939 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.77□□□□□ -1.81
SCN2BO60939 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN2BO60939 MIR1251-201ENST00000408552 70 ntBASIC3.77□□□□□ -1.81
SCN2BO60939 TPT1P2-201ENST00000413105 503 ntBASIC3.77□□□□□ -1.81
SCN2BO60939 AC093698.1-201ENST00000423843 571 ntBASIC3.77□□□□□ -1.81
SCN2BO60939 RPL18P10-201ENST00000425606 538 ntBASIC3.77□□□□□ -1.81
SCN2BO60939 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN2BO60939 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN2BO60939 AL356276.2-201ENST00000435919 558 ntBASIC3.77□□□□□ -1.81
SCN2BO60939 C1DP3-201ENST00000455013 423 ntBASIC3.77□□□□□ -1.81
SCN2BO60939 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN2BO60939 RPL38P1-201ENST00000460914 211 ntBASIC3.77□□□□□ -1.81
SCN2BO60939 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN2BO60939 BTF3L4P4-201ENST00000506381 449 ntBASIC3.77□□□□□ -1.81
SCN2BO60939 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN2BO60939 OR5H4P-201ENST00000510851 923 ntBASIC3.77□□□□□ -1.81
SCN2BO60939 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN2BO60939 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCN2BO60939 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN2BO60939 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCN2BO60939 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN2BO60939 AL589935.2-201ENST00000616471 1231 ntBASIC3.77□□□□□ -1.81
SCN2BO60939 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.77□□□□□ -1.81
SCN2BO60939 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN2BO60939 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN2BO60939 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCN2BO60939 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN2BO60939 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN2BO60939 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN2BO60939 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.76□□□□□ -1.81
SCN2BO60939 AC005261.4-201ENST00000600047 1385 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.76□□□□□ -1.81
SCN2BO60939 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCN2BO60939 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SCN2BO60939 OR11H4-201ENST00000315409 1082 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 RNA5SP399-201ENST00000364003 117 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 RNU11-4P-201ENST00000391149 133 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 RPS27AP11-201ENST00000402798 447 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 HSPE1P12-201ENST00000412576 301 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.76□□□□□ -1.81
SCN2BO60939 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN2BO60939 COX6CP15-201ENST00000426313 211 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 NPM1P34-201ENST00000428821 893 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 ELOCP6-201ENST00000429066 328 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SCN2BO60939 AL031663.1-201ENST00000437445 219 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 HMGB1P37-201ENST00000439613 609 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 FCF1P7-201ENST00000451185 558 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 ELOCP12-201ENST00000458706 328 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 UQCRHP4-201ENST00000471686 272 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 AC105137.1-201ENST00000484355 562 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 AC026726.1-201ENST00000512859 601 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.76□□□□□ -1.81
SCN2BO60939 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.76□□□□□ -1.81
SCN2BO60939 Vault.1-201ENST00000516474 102 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.76□□□□□ -1.81
SCN2BO60939 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN2BO60939 AC034205.1-201ENST00000520621 638 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN2BO60939 AP003730.1-201ENST00000524605 285 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.76□□□□□ -1.81
SCN2BO60939 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.76□□□□□ -1.81
SCN2BO60939 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN2BO60939 YPEL5P3-201ENST00000547227 352 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN2BO60939 AC015911.5-201ENST00000587076 451 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.76□□□□□ -1.81
SCN2BO60939 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.76□□□□□ -1.81
SCN2BO60939 MIR6868-201ENST00000611215 58 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 AC010608.2-201ENST00000624830 470 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SCN2BO60939 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCN2BO60939 AC087565.3-202ENST00000642085 1603 ntBASIC3.76□□□□□ -1.81
SCN2BO60939 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCN2BO60939 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCN2BO60939 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SCN2BO60939 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SCN2BO60939 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SCN2BO60939 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SCN2BO60939 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SCN2BO60939 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SCN2BO60939 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SCN2BO60939 RNA5SP167-201ENST00000365461 116 ntBASIC3.75□□□□□ -1.81
SCN2BO60939 SNORA11B-201ENST00000408175 129 ntBASIC3.75□□□□□ -1.81
SCN2BO60939 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.75□□□□□ -1.81
SCN2BO60939 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.75□□□□□ -1.81
SCN2BO60939 RPL31P45-201ENST00000419532 356 ntBASIC3.75□□□□□ -1.81
SCN2BO60939 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SCN2BO60939 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.75□□□□□ -1.81
SCN2BO60939 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.75□□□□□ -1.81
SCN2BO60939 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.75□□□□□ -1.81
SCN2BO60939 RPS11P1-201ENST00000451072 473 ntBASIC3.75□□□□□ -1.81
SCN2BO60939 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms