Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RPS4XP9-201ENST00000405151 780 ntBASIC4.6□□□□□ -1.67
LDB2O43679 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LDB2O43679 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.6□□□□□ -1.67
LDB2O43679 FAR2P2-201ENST00000413041 594 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AC119751.6-201ENST00000416712 186 ntBASIC4.6□□□□□ -1.67
LDB2O43679 MFSD13B-201ENST00000420133 1290 ntBASIC4.6□□□□□ -1.67
LDB2O43679 FAR2P4-202ENST00000425399 584 ntBASIC4.6□□□□□ -1.67
LDB2O43679 MOB1AP1-201ENST00000430903 535 ntBASIC4.6□□□□□ -1.67
LDB2O43679 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.6□□□□□ -1.67
LDB2O43679 AL008629.1-201ENST00000438615 184 ntBASIC4.6□□□□□ -1.67
LDB2O43679 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.6□□□□□ -1.67
LDB2O43679 AL929288.2-201ENST00000446368 407 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AL591623.2-201ENST00000449978 222 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.6□□□□□ -1.67
LDB2O43679 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.6□□□□□ -1.67
LDB2O43679 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.6□□□□□ -1.67
LDB2O43679 RNU7-27P-201ENST00000459281 62 ntBASIC4.6□□□□□ -1.67
LDB2O43679 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.6□□□□□ -1.67
LDB2O43679 RPL12P20-201ENST00000475538 479 ntBASIC4.6□□□□□ -1.67
LDB2O43679 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.6□□□□□ -1.67
LDB2O43679 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.6□□□□□ -1.67
LDB2O43679 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.6□□□□□ -1.67
LDB2O43679 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.6□□□□□ -1.67
LDB2O43679 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.6□□□□□ -1.67
LDB2O43679 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 AC125611.1-201ENST00000549563 229 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.6□□□□□ -1.67
LDB2O43679 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.6□□□□□ -1.67
LDB2O43679 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.6□□□□□ -1.67
LDB2O43679 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.6□□□□□ -1.67
LDB2O43679 RN7SL690P-201ENST00000582087 240 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.6□□□□□ -1.67
LDB2O43679 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.6□□□□□ -1.67
LDB2O43679 AC040904.1-201ENST00000590850 223 ntBASIC4.6□□□□□ -1.67
LDB2O43679 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.6□□□□□ -1.67
LDB2O43679 AC068790.7-201ENST00000602347 528 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AC080013.6-201ENST00000606185 215 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AL158163.2-201ENST00000619110 700 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AC131159.1-201ENST00000621854 213 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AP000346.3-201ENST00000622821 210 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AL512506.2-201ENST00000624472 458 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AC068137.4-201ENST00000638485 296 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AC108751.5-201ENST00000492880 1336 ntBASIC4.6□□□□□ -1.67
LDB2O43679 HSPA8P17-201ENST00000427029 1382 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AC005261.4-201ENST00000600047 1385 ntBASIC4.6□□□□□ -1.67
LDB2O43679 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
LDB2O43679 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 AC100871.1-201ENST00000507871 1456 ntBASIC4.6□□□□□ -1.67
LDB2O43679 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 AL137100.1-201ENST00000556703 1620 ntBASIC4.6□□□□□ -1.67
LDB2O43679 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LDB2O43679 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.6□□□□□ -1.67
LDB2O43679 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.6□□□□□ -1.67
LDB2O43679 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LDB2O43679 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.6□□□□□ -1.67
LDB2O43679 AC125257.1-201ENST00000560400 2930 ntBASIC4.59□□□□□ -1.67
LDB2O43679 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LDB2O43679 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LDB2O43679 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
LDB2O43679 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
LDB2O43679 NACA3P-201ENST00000359690 648 ntBASIC4.59□□□□□ -1.67
LDB2O43679 SNORD113-6-201ENST00000363345 75 ntBASIC4.59□□□□□ -1.67
LDB2O43679 Y_RNA.169-201ENST00000363745 96 ntBASIC4.59□□□□□ -1.67
LDB2O43679 SNORA62.2-201ENST00000364672 152 ntBASIC4.59□□□□□ -1.67
LDB2O43679 SNORD116.1-201ENST00000365628 92 ntBASIC4.59□□□□□ -1.67
LDB2O43679 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
LDB2O43679 RNU6-83P-201ENST00000384568 112 ntBASIC4.59□□□□□ -1.67
LDB2O43679 MIR525-201ENST00000384978 85 ntBASIC4.59□□□□□ -1.67
LDB2O43679 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LDB2O43679 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LDB2O43679 AL049697.2-201ENST00000403708 294 ntBASIC4.59□□□□□ -1.67
LDB2O43679 SFR1P1-201ENST00000403720 688 ntBASIC4.59□□□□□ -1.67
LDB2O43679 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.59□□□□□ -1.67
LDB2O43679 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.59□□□□□ -1.67
LDB2O43679 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.59□□□□□ -1.67
LDB2O43679 RPL21P91-201ENST00000429231 479 ntBASIC4.59□□□□□ -1.67
LDB2O43679 CDY14P-201ENST00000431260 1014 ntBASIC4.59□□□□□ -1.67
LDB2O43679 AL359265.2-201ENST00000434367 631 ntBASIC4.59□□□□□ -1.67
LDB2O43679 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.59□□□□□ -1.67
LDB2O43679 CDY12P-201ENST00000440679 1015 ntBASIC4.59□□□□□ -1.67
LDB2O43679 AC011753.3-201ENST00000443436 406 ntBASIC4.59□□□□□ -1.67
LDB2O43679 CDY13P-201ENST00000445813 1015 ntBASIC4.59□□□□□ -1.67
LDB2O43679 AC007327.1-201ENST00000447461 264 ntBASIC4.59□□□□□ -1.67
LDB2O43679 CDY23P-201ENST00000451661 1014 ntBASIC4.59□□□□□ -1.67
LDB2O43679 AC000367.1-201ENST00000452711 1766 ntBASIC4.59□□□□□ -1.67
LDB2O43679 ART2BP-201ENST00000453501 499 ntBASIC4.59□□□□□ -1.67
LDB2O43679 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.59□□□□□ -1.67
LDB2O43679 ATG12P2-201ENST00000456830 416 ntBASIC4.59□□□□□ -1.67
LDB2O43679 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.59□□□□□ -1.67
LDB2O43679 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
LDB2O43679 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.59□□□□□ -1.67
LDB2O43679 RN7SL354P-201ENST00000469282 294 ntBASIC4.59□□□□□ -1.67
LDB2O43679 RPS3AP22-201ENST00000488297 769 ntBASIC4.59□□□□□ -1.67
LDB2O43679 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.59□□□□□ -1.67
LDB2O43679 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms