Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CLIC4P1-201ENST00000453177 535 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.64□□□□□ -1.83
UPK1AO00322 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
UPK1AO00322 RPS3AP6-201ENST00000484430 795 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 RPS4XP15-201ENST00000489210 795 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 MTCO3P42-201ENST00000509488 518 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 AC108064.1-201ENST00000513791 460 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 MTCO3P39-201ENST00000514812 518 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.64□□□□□ -1.83
UPK1AO00322 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UPK1AO00322 NPM1P35-201ENST00000533043 868 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.64□□□□□ -1.83
UPK1AO00322 AC091515.1-201ENST00000548110 679 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 AC119501.1-201ENST00000603646 475 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 Z82195.1-201ENST00000604558 398 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.64□□□□□ -1.83
UPK1AO00322 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UPK1AO00322 AC073530.2-201ENST00000623987 261 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
UPK1AO00322 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
UPK1AO00322 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
UPK1AO00322 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.64□□□□□ -1.83
UPK1AO00322 CASC19-284ENST00000642142 1868 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.64□□□□□ -1.83
UPK1AO00322 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.64□□□□□ -1.83
UPK1AO00322 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.64□□□□□ -1.83
UPK1AO00322 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.64□□□□□ -1.83
UPK1AO00322 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
UPK1AO00322 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UPK1AO00322 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.63□□□□□ -1.83
UPK1AO00322 BX005019.1-201ENST00000561881 1810 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UPK1AO00322 SPRR2C-201ENST00000290702 219 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AC011155.1-201ENST00000316512 456 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 MIR372-201ENST00000362225 67 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 RNU6-1251P-201ENST00000364502 107 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
UPK1AO00322 MT-TP-201ENST00000387461 68 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.63□□□□□ -1.83
UPK1AO00322 AL391417.1-201ENST00000404100 426 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.63□□□□□ -1.83
UPK1AO00322 Z97055.1-201ENST00000419730 712 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 RWDD4P2-201ENST00000426392 563 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.63□□□□□ -1.83
UPK1AO00322 AL162151.2-201ENST00000448875 158 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 EIF2S2P4-201ENST00000461070 984 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 RPL21P11-201ENST00000461458 483 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1AO00322 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1AO00322 PPIAP15-201ENST00000479662 484 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 RWDD4P1-201ENST00000488019 565 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AC092045.1-201ENST00000495716 1231 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AC021146.1-201ENST00000511202 716 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 FTH1P21-201ENST00000512179 511 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1AO00322 MTCO1P35-201ENST00000515270 228 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 RN7SKP83-201ENST00000516512 178 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1AO00322 IGKV2D-10-201ENST00000520194 281 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1AO00322 OR4A12P-201ENST00000530847 918 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1AO00322 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1AO00322 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1AO00322 PARP1P2-201ENST00000556806 195 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1AO00322 CYP2C60P-201ENST00000566088 139 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AC009101.1-201ENST00000568135 242 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AC027281.1-201ENST00000574178 758 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AL592436.1-201ENST00000605135 558 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AC034236.3-201ENST00000605999 461 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.63□□□□□ -1.83
UPK1AO00322 MIR6500-201ENST00000622700 86 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 AC145207.9-201ENST00000623802 325 ntBASIC3.63□□□□□ -1.83
UPK1AO00322 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UPK1AO00322 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
UPK1AO00322 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
UPK1AO00322 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
UPK1AO00322 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
UPK1AO00322 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UPK1AO00322 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1AO00322 RNU6-1279P-201ENST00000383917 103 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 MIR199A2-201ENST00000385289 110 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
UPK1AO00322 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1AO00322 CYP4F29P-201ENST00000420685 446 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 AC093698.1-201ENST00000423843 571 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 OR5AW1P-201ENST00000426334 1006 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 DPY19L1P2-201ENST00000426647 915 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 RPS26P47-201ENST00000427219 348 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 YY1P1-201ENST00000427625 668 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1AO00322 RPS27AP12-201ENST00000429552 465 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 AL117339.2-201ENST00000430475 180 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.62□□□□□ -1.83
UPK1AO00322 RPS29P31-201ENST00000446147 164 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 EXTL2P1-201ENST00000446218 416 ntBASIC3.62□□□□□ -1.83
UPK1AO00322 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms