Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AC053481.4-201ENST00000583164 216 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AL049844.2-201ENST00000604280 628 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AP004607.9-201ENST00000618202 316 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 CASC19-261ENST00000641853 1638 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 KPNA2P2-201ENST00000419546 1489 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 FAM91A3P-201ENST00000456826 2544 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 RNU6-666P-201ENST00000363499 107 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AL160275.2-201ENST00000412010 394 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 PDSS1P1-201ENST00000422953 1114 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 OR8F1P-201ENST00000425243 930 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 OR5BE1P-201ENST00000425977 939 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 MTCO1P52-201ENST00000433928 531 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC015908.1-201ENST00000478739 476 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC110792.1-201ENST00000491826 472 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 BNIP3P41-201ENST00000503774 571 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 NDUFB4P12-201ENST00000513465 390 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 MED28P5-201ENST00000528254 438 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 OSBPL9P3-201ENST00000534523 595 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC092451.2-201ENST00000538746 658 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC034105.4-201ENST00000568304 277 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 TMF1P1-201ENST00000576058 373 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC079880.2-201ENST00000603790 1213 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AL136370.1-201ENST00000608166 691 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AL109620.1-201ENST00000618738 1197 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AP003400.6-201ENST00000624698 740 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 OR5BE1P-202ENST00000641168 1176 ntBASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD8-MDP1E9PL57 AC092162.3-201ENST00000624511 1624 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC067945.1-201ENST00000342609 618 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 HSPD1P16-201ENST00000402302 394 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 ATP5F1P6-201ENST00000402768 767 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 LAP3P1-201ENST00000403648 294 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 HDGFP1-201ENST00000405943 252 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 RNU4-27P-201ENST00000410889 139 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AL691449.1-201ENST00000426570 421 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 UBE2D3P3-201ENST00000426992 425 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 PTP4A1P3-201ENST00000433661 420 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 GEMIN8P3-201ENST00000445417 720 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 FGF7P3-201ENST00000454645 303 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 RPL7P1-201ENST00000468161 747 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 RPL7P9-201ENST00000468715 747 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 RN7SL132P-201ENST00000478131 296 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 CIR1P1-201ENST00000524055 1133 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC008083.2-201ENST00000546707 476 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC063950.1-201ENST00000552036 308 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms