Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC011998.1-201ENST00000433403 117 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 MTCYBP12-201ENST00000440559 1134 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 OR10R1P-201ENST00000441524 1141 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AL358794.1-201ENST00000445689 381 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 MTND2P8-201ENST00000450555 1025 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 RPS20P4-201ENST00000461659 355 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AC011276.1-201ENST00000469688 323 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 NDUFA5P9-201ENST00000472609 340 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 PGBD4P4-201ENST00000509673 613 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AC093840.1-201ENST00000511599 336 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 RN7SKP287-201ENST00000516546 266 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AC068446.3-201ENST00000555285 382 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AC090888.2-201ENST00000559765 1144 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AC106052.1-201ENST00000608029 497 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AC087683.2-201ENST00000611384 326 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 LINC01355-201ENST00000566551 5444 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 MTND4P26-201ENST00000415971 1359 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 SCN1A-220ENST00000641603 12506 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 KPNA2P2-201ENST00000419546 1489 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AC008033.1-201ENST00000216407 1162 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 RNU5B-1-201ENST00000363286 116 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 RNA5SP151-201ENST00000365632 117 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 RNU6-146P-201ENST00000384602 108 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 USP9YP21-201ENST00000420603 432 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 OR2X1P-201ENST00000421144 687 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AC073143.1-201ENST00000436316 395 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AL096803.2-201ENST00000450032 677 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 DHFRP3-201ENST00000455595 559 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AC020898.1-201ENST00000474167 787 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 RPS27AP16-201ENST00000492222 470 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AC026414.1-201ENST00000504046 698 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AC021146.3-201ENST00000511911 260 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 RNU6-1308P-201ENST00000516817 103 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AP003717.3-201ENST00000544832 1180 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 CYB5AP5-201ENST00000549779 389 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 PSMA6P4-201ENST00000603247 718 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 Z99289.3-201ENST00000605586 594 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AL365400.2-201ENST00000605604 902 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AC009159.2-201ENST00000617603 606 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 MIR6891-201ENST00000618788 93 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 MIR6758-201ENST00000620653 63 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AL023881.1-201ENST00000621088 301 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.76□□□□□ -1.65
SNX9Q9Y5X1 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC114546.3-201ENST00000623582 1734 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 OR5P1P-201ENST00000299512 925 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 RNA5SP509-201ENST00000364577 119 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms