Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AP005262.1-201ENST00000582646 997 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AL353778.1-201ENST00000603149 408 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AC069304.2-201ENST00000605154 435 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AC005962.2-201ENST00000611427 652 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AP000843.1-201ENST00000624880 701 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 AC112198.2-201ENST00000426589 6996 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 MUC2-202ENST00000613187 4845 ntBASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL4A3BPQ9Y5P4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AL139811.1-201ENST00000424779 2299 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 Z95327.2-201ENST00000414579 1873 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 RNU6-931P-201ENST00000363850 107 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 RNU4-4P-201ENST00000364588 130 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 PEX12P1-201ENST00000400284 1048 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 RSL24D1P4-201ENST00000400938 484 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AL589647.1-201ENST00000402485 466 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC012519.1-201ENST00000424588 610 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 OR4F13P-201ENST00000428478 931 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC092647.3-201ENST00000443044 633 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC021660.1-201ENST00000465006 554 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 OR4G11P-201ENST00000492842 939 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC004980.4-201ENST00000513375 203 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 RNU6-1129P-201ENST00000515964 104 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AP001636.2-201ENST00000525517 696 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 OR5AZ1P-201ENST00000527448 943 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC008127.2-201ENST00000549925 1075 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AL389895.1-201ENST00000554127 252 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AL359219.2-201ENST00000555184 348 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC127024.5-201ENST00000580085 462 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC103881.1-201ENST00000603476 538 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC007566.2-201ENST00000603642 413 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC115621.1-201ENST00000604653 858 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AL133507.1-201ENST00000605269 557 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC004908.3-201ENST00000610248 625 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC092650.2-201ENST00000619984 902 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AC078883.4-201ENST00000623218 367 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AL596275.2-204ENST00000641628 552 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AL596275.2-206ENST00000641957 626 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 AP000473.2-201ENST00000602659 1537 ntBASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.73□□□□□ -1.49
COL4A3BPQ9Y5P4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC011755.1-201ENST00000623763 2049 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 OR56B2P-201ENST00000317102 954 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 RNU6-1226P-201ENST00000384317 107 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AL645733.1-201ENST00000402250 217 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AL390316.1-201ENST00000406279 553 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC073136.2-201ENST00000417282 849 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 MTND4P20-201ENST00000424125 869 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 RPS27P18-201ENST00000431701 247 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 RPS25P9-201ENST00000435591 252 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 RPL12P3-201ENST00000440080 396 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC245028.2-201ENST00000458673 253 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 RN7SL97P-201ENST00000486780 299 ntBASIC5.72□□□□□ -1.49
COL4A3BPQ9Y5P4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms