Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 OR4A15-201ENST00000314706 1035 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 SNORA70.6-201ENST00000383934 134 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 Y_RNA.436-201ENST00000384097 102 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 RNU6-441P-201ENST00000384545 106 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 MIR765-201ENST00000390226 114 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 RNU1-77P-201ENST00000390868 162 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 RN7SKP125-201ENST00000410481 302 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AC073335.1-201ENST00000427776 363 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 UBE2FP3-201ENST00000436366 524 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AC092427.1-201ENST00000439177 601 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 RPL23AP16-201ENST00000441715 421 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 DUTP1-201ENST00000493631 470 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AC080014.1-201ENST00000496877 1201 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 HMGB3P13-201ENST00000511263 607 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 BLZF2P-201ENST00000553776 1130 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 WISP1-OT1-201ENST00000602893 642 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AL158063.1-201ENST00000615349 536 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 MIR7844-201ENST00000616161 122 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AC079228.1-201ENST00000624774 1049 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 AC006927.3-201ENST00000638789 384 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 MTND5P28-201ENST00000438005 1594 ntBASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHGA3Q9Y5H0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AC004817.4-201ENST00000602396 3625 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 Y_RNA.51-201ENST00000362725 102 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 U8.4-201ENST00000363626 134 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 MIR649-201ENST00000384843 97 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 MT-TH-201ENST00000387441 69 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 RNA5SP339-201ENST00000390987 122 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 NUDT19P3-201ENST00000404698 555 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 RPS3AP9-201ENST00000417027 792 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 RNF10P1-201ENST00000418589 369 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 RPL12P34-201ENST00000424532 479 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AC012519.1-201ENST00000424588 610 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AC234779.1-201ENST00000425910 285 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AC105399.1-202ENST00000447303 205 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 APOOP2-201ENST00000461561 539 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AC114981.1-201ENST00000503897 678 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 SNX5P1-201ENST00000505757 1041 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 HSPE1P23-201ENST00000509838 286 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 MTCYBP37-201ENST00000510642 1133 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AC026412.2-201ENST00000512270 1075 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 IGLV3-24-201ENST00000517477 197 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 HIGD1AP10-201ENST00000527837 282 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AP000790.1-201ENST00000528891 737 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AC104785.1-201ENST00000603220 588 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AC093765.1-201ENST00000603758 881 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AL451086.1-201ENST00000605596 223 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms