Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 NF1P5-201ENST00000588287 448 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 IPO5P1-202ENST00000600039 287 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC005034.4-201ENST00000603612 899 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC067959.1-201ENST00000604334 379 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 MIR432-201ENST00000606207 94 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC017076.1-201ENST00000607613 578 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC103858.2-201ENST00000621471 543 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 LINC01808-202ENST00000641680 1116 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF6Q9Y252 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC018529.3-201ENST00000624212 2254 ntBASIC4.05□□□□□ -1.76
RNF6Q9Y252 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF6Q9Y252 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNF6Q9Y252 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF6Q9Y252 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 RNA5SP388-201ENST00000362584 119 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 RNU6-98P-201ENST00000384173 107 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF6Q9Y252 MIR1303-201ENST00000408625 86 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 MIR1911-201ENST00000410783 80 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF6Q9Y252 RPS12P10-201ENST00000427031 377 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 KCTD10P1-201ENST00000434203 625 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 RPL7P29-201ENST00000437151 728 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 MTND4P15-201ENST00000437913 1033 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC239367.2-201ENST00000447309 705 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC010468.3-201ENST00000508225 458 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 MRPL49P2-201ENST00000521066 465 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 OSBPL9P3-201ENST00000534523 595 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF6Q9Y252 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AL109618.2-201ENST00000605527 211 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC123768.4-201ENST00000616244 701 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC019278.1-201ENST00000623516 479 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF6Q9Y252 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF6Q9Y252 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF6Q9Y252 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF6Q9Y252 MFSD8-242ENST00000641690 4199 ntBASIC4.04□□□□□ -1.76
RNF6Q9Y252 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
RNF6Q9Y252 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF6Q9Y252 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF6Q9Y252 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF6Q9Y252 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF6Q9Y252 AC018555.1-201ENST00000567548 1980 ntBASIC4.03□□□□□ -1.76
RNF6Q9Y252 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF6Q9Y252 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF6Q9Y252 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF6Q9Y252 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RNF6Q9Y252 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF6Q9Y252 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF6Q9Y252 RNU6-252P-201ENST00000363232 107 ntBASIC4.03□□□□□ -1.76
RNF6Q9Y252 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.03□□□□□ -1.76
RNF6Q9Y252 VTA1P1-201ENST00000414044 866 ntBASIC4.03□□□□□ -1.76
RNF6Q9Y252 AC234782.4-201ENST00000417646 1048 ntBASIC4.03□□□□□ -1.76
RNF6Q9Y252 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.03□□□□□ -1.76
RNF6Q9Y252 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.03□□□□□ -1.76
RNF6Q9Y252 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.03□□□□□ -1.76
RNF6Q9Y252 ELOCP11-201ENST00000436690 332 ntBASIC4.03□□□□□ -1.76
RNF6Q9Y252 ACTR3P2-201ENST00000439585 1257 ntBASIC4.03□□□□□ -1.76
RNF6Q9Y252 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RNF6Q9Y252 ELOCP16-201ENST00000444494 332 ntBASIC4.03□□□□□ -1.76
RNF6Q9Y252 PHBP16-201ENST00000446318 950 ntBASIC4.03□□□□□ -1.76
RNF6Q9Y252 AC092685.1-201ENST00000447960 1243 ntBASIC4.03□□□□□ -1.76
RNF6Q9Y252 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.03□□□□□ -1.76
RNF6Q9Y252 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.03□□□□□ -1.76
RNF6Q9Y252 AC012671.1-201ENST00000451912 203 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms