Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC017071.1-201ENST00000564407 2204 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AL137141.1-201ENST00000624622 4836 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 RPL21P110-201ENST00000433345 446 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 RPL36AP13-201ENST00000457490 317 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC114781.4-201ENST00000513707 639 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC022080.3-201ENST00000544433 482 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC098934.3-201ENST00000430450 190 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 RPS27AP17-201ENST00000463344 455 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC015802.5-201ENST00000607478 399 ntBASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC1.54□□□□□ -2.16
MACF1Q9UPN3 AC239868.2-201ENST00000564237 4527 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 DMD-205ENST00000359836 7339 ntTSL 5 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 HMGB1P12-201ENST00000438594 598 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AC140076.1-201ENST00000449897 361 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AC008549.1-201ENST00000512900 643 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 Y_RNA.68-201ENST00000362881 102 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 ZNF602P-201ENST00000405929 924 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 HSPE1P27-201ENST00000430808 296 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 RNA5SP179-201ENST00000517284 121 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 OR4A12P-201ENST00000530847 918 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 GTF3AP2-201ENST00000557014 266 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AL136131.1-201ENST00000406079 803 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 ATP5JP1-201ENST00000431631 322 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 SNRPFP2-201ENST00000440710 251 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 MIR7851-201ENST00000610611 160 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 U1.31-201ENST00000620022 160 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AL049780.3-201ENST00000624612 1583 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 MIR512-1-201ENST00000384913 84 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms