Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC073464.3-201ENST00000422564 712 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 AL162151.2-201ENST00000448875 158 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 MTCO3P20-201ENST00000454926 688 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 AC106872.2-201ENST00000494303 480 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 RN7SKP209-201ENST00000516888 304 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 RFPL1S-203ENST00000539579 330 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 CBX3P5-201ENST00000552017 521 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 AL133457.1-201ENST00000564251 987 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 AL354760.1-201ENST00000608357 643 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 AP003400.2-201ENST00000624036 666 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 AF001550.2-201ENST00000636643 217 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 OR5AC4P-202ENST00000642086 985 ntBASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
VPS29Q9UBQ0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VPS29Q9UBQ0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.65□□□□□ -1.82
VPS29Q9UBQ0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.65□□□□□ -1.82
VPS29Q9UBQ0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 RNU1-18P-201ENST00000363062 164 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AL049693.1-201ENST00000402760 611 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 RNA5SP239-201ENST00000410218 129 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 HIGD1AP12-201ENST00000427832 281 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 Z74696.2-201ENST00000436514 498 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AC006326.1-201ENST00000445465 787 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AC009220.1-201ENST00000451614 275 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AL645939.1-201ENST00000453429 797 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 MTND6P6-201ENST00000478031 263 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 FTH1P21-201ENST00000512179 511 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 IGHV3-32-201ENST00000519182 355 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AC015726.1-201ENST00000602353 681 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AC034236.3-201ENST00000605999 461 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 BX323046.1-201ENST00000610145 535 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 uc_338.32-201ENST00000615087 172 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 CFTRP2-201ENST00000634304 199 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 AC006504.1-201ENST00000562493 3666 ntBASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS29Q9UBQ0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 AL356317.1-201ENST00000396110 1436 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 AC007529.1-201ENST00000418574 2178 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 FAM35DP-201ENST00000323387 2712 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 RNU6-697P-201ENST00000363348 107 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 RNU1-13P-201ENST00000384499 162 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 MIR141-201ENST00000384975 95 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 AC073069.1-201ENST00000428657 441 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 SNORA71B-202ENST00000439232 272 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 AC006480.1-201ENST00000449887 378 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 CYCSP53-201ENST00000455540 265 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 RAC1P2-201ENST00000511164 579 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 AC108064.1-201ENST00000513791 460 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 AL606490.9-201ENST00000603331 271 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 AL590392.1-201ENST00000604960 446 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 AC009318.3-201ENST00000616916 503 ntBASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS29Q9UBQ0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms