Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AP000843.1-201ENST00000624880 701 ntBASIC5.09□□□□□ -1.59
HDAC6Q9UBN7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HDAC6Q9UBN7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.09□□□□□ -1.59
HDAC6Q9UBN7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
HDAC6Q9UBN7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HDAC6Q9UBN7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
HDAC6Q9UBN7 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
HDAC6Q9UBN7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
HDAC6Q9UBN7 AL031119.1-201ENST00000404707 1879 ntBASIC5.09□□□□□ -1.6
HDAC6Q9UBN7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HDAC6Q9UBN7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HDAC6Q9UBN7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC135352.1-201ENST00000506173 1418 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC093311.1-201ENST00000506586 2021 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC009951.1-201ENST00000623674 2614 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 ATP5F1P2-201ENST00000398143 760 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AP001324.1-201ENST00000428553 399 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AL357520.1-201ENST00000441557 453 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 OR51B8P-201ENST00000449892 769 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC005008.1-201ENST00000456151 612 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 RPL7P48-201ENST00000461513 746 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 RPS27AP16-201ENST00000492222 470 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 RPL21P131-201ENST00000497298 483 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC023050.1-201ENST00000498198 304 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC098799.3-201ENST00000506095 438 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 TCP11X3P-202ENST00000514289 1254 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC134698.5-201ENST00000519444 336 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AP001207.2-201ENST00000519490 539 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AL132857.1-201ENST00000555180 708 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC015912.2-201ENST00000571053 181 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC125494.3-201ENST00000602759 455 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC112220.2-201ENST00000605513 533 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC140113.4-201ENST00000622087 222 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AP002967.1-201ENST00000624203 539 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AP003497.2-201ENST00000624220 967 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AC125257.1-201ENST00000560400 2930 ntBASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.08□□□□□ -1.6
HDAC6Q9UBN7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 RNU1-20P-201ENST00000363314 162 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 SNORA62.2-201ENST00000364672 152 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 OSTCP5-201ENST00000425293 453 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 RPL7P29-201ENST00000437151 728 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 SNORD11.1-201ENST00000459482 85 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 RN7SL810P-201ENST00000493031 276 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC104108.1-201ENST00000509930 412 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC026402.1-201ENST00000513642 170 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 CYCSP29-201ENST00000533731 318 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 BNIP3P5-201ENST00000562290 498 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC007224.1-201ENST00000564410 144 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC011477.5-201ENST00000586571 259 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC023813.4-201ENST00000607580 580 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 AC139713.2-210ENST00000641741 992 ntBASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HDAC6Q9UBN7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.06□□□□□ -1.6
HDAC6Q9UBN7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
HDAC6Q9UBN7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC6Q9UBN7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.06□□□□□ -1.6
HDAC6Q9UBN7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.06□□□□□ -1.6
HDAC6Q9UBN7 AL391684.1-202ENST00000641293 1636 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms