Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS11Q9H270 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS11Q9H270 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
VPS11Q9H270 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS11Q9H270 AP000769.2-201ENST00000602344 396 ntBASIC5.45□□□□□ -1.54
VPS11Q9H270 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS11Q9H270 AL359091.2-201ENST00000609303 556 ntBASIC5.45□□□□□ -1.54
VPS11Q9H270 AC090970.3-201ENST00000612566 866 ntBASIC5.45□□□□□ -1.54
VPS11Q9H270 AL353726.1-201ENST00000614041 1000 ntBASIC5.45□□□□□ -1.54
VPS11Q9H270 AC129778.1-202ENST00000623812 261 ntBASIC5.45□□□□□ -1.54
VPS11Q9H270 AL157786.1-207ENST00000627771 695 ntBASIC5.45□□□□□ -1.54
VPS11Q9H270 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS11Q9H270 AL591379.1-207ENST00000635982 261 ntBASIC5.45□□□□□ -1.54
VPS11Q9H270 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.45□□□□□ -1.54
VPS11Q9H270 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS11Q9H270 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS11Q9H270 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
VPS11Q9H270 AL450345.1-202ENST00000605741 3881 ntBASIC5.45□□□□□ -1.54
VPS11Q9H270 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS11Q9H270 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS11Q9H270 AC090229.1-201ENST00000590983 1609 ntBASIC5.45□□□□□ -1.54
VPS11Q9H270 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS11Q9H270 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS11Q9H270 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS11Q9H270 SRRM1P3-201ENST00000426911 2678 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AC114947.2-201ENST00000565748 2125 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS11Q9H270 OR56B2P-201ENST00000317102 954 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS11Q9H270 Y_RNA.256-201ENST00000364594 104 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS11Q9H270 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
VPS11Q9H270 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 RPL7P8-201ENST00000411964 730 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 CTSL3P-202ENST00000412179 788 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS11Q9H270 OFD1P18Y-201ENST00000420889 959 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AL009174.1-201ENST00000426577 416 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 ISCA1P1-201ENST00000426679 387 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS11Q9H270 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS11Q9H270 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS11Q9H270 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AC110602.1-201ENST00000437414 318 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AL589765.3-201ENST00000446084 462 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS11Q9H270 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS11Q9H270 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AC245028.2-201ENST00000458673 253 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 RN7SL168P-201ENST00000463821 279 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AL121769.1-201ENST00000469473 401 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AC109486.1-201ENST00000486833 374 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.44□□□□□ -1.54
VPS11Q9H270 FAM92A1P2-202ENST00000504766 877 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AC104090.1-201ENST00000506341 1171 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 RFPL4AP5-201ENST00000514977 504 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 RNU6-416P-201ENST00000516265 103 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS11Q9H270 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS11Q9H270 MTCO3P15-201ENST00000526563 574 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AC074029.1-201ENST00000552531 1044 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 NIFKP8-201ENST00000560500 874 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AL138976.2-201ENST00000563989 694 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AC116553.2-201ENST00000564203 463 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AL392112.1-201ENST00000605115 829 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AC025594.3-201ENST00000613068 790 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AC104260.1-201ENST00000616660 539 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AC006338.1-201ENST00000618453 749 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS11Q9H270 AC008443.7-201ENST00000622195 246 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 AC135068.5-201ENST00000624197 983 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 OR1S1-201ENST00000624470 978 ntBASIC5.44□□□□□ -1.54
VPS11Q9H270 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS11Q9H270 FER-210ENST00000628534 558 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS11Q9H270 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS11Q9H270 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS11Q9H270 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
VPS11Q9H270 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS11Q9H270 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS11Q9H270 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS11Q9H270 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS11Q9H270 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS11Q9H270 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS11Q9H270 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS11Q9H270 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS11Q9H270 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms