Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC119744.1-201ENST00000454746 1715 ntBASIC4.91□□□□□ -1.62
AMBRA1Q9C0C7 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
AMBRA1Q9C0C7 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
AMBRA1Q9C0C7 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.91□□□□□ -1.62
AMBRA1Q9C0C7 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
AMBRA1Q9C0C7 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
AMBRA1Q9C0C7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
AMBRA1Q9C0C7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
AMBRA1Q9C0C7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.9□□□□□ -1.62
AMBRA1Q9C0C7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
AMBRA1Q9C0C7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
AMBRA1Q9C0C7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.9□□□□□ -1.62
AMBRA1Q9C0C7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
AMBRA1Q9C0C7 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.9□□□□□ -1.62
AMBRA1Q9C0C7 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.9□□□□□ -1.62
AMBRA1Q9C0C7 RNU4-2-201ENST00000365668 141 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AL133264.1-201ENST00000407157 562 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 RPL23AP47-201ENST00000408017 460 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC007738.1-201ENST00000413892 348 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 OR2AH1P-201ENST00000425717 928 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AL031663.1-201ENST00000437445 219 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 RPS27AP15-201ENST00000447672 466 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC108161.1-201ENST00000461060 402 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC010307.1-201ENST00000467206 836 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 RN7SL329P-201ENST00000467740 299 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC004069.2-201ENST00000505438 1114 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 CBX3P3-201ENST00000508108 532 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC079140.3-201ENST00000511111 550 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 RNU6-720P-201ENST00000516363 108 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 RN7SKP283-201ENST00000517197 270 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 IGKV2-36-201ENST00000519999 223 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 EIF4A2P5-201ENST00000529914 499 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 HAUS8P1-201ENST00000549005 542 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AL358913.1-201ENST00000554342 121 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC008507.1-201ENST00000587506 734 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AL137072.1-201ENST00000603444 466 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AL162431.4-201ENST00000604674 411 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC005332.10-201ENST00000612725 619 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC015540.1-201ENST00000615828 501 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC073968.1-201ENST00000618594 637 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC018755.4-201ENST00000619715 454 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC132068.1-201ENST00000623805 459 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AC023421.1-201ENST00000590535 1785 ntBASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
AMBRA1Q9C0C7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AL031595.2-201ENST00000624215 19071 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 RNU6-582P-201ENST00000362989 107 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 Y_RNA.517-201ENST00000384551 106 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 MIR589-201ENST00000385238 99 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 PGBD4P8-201ENST00000412993 562 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 C8orf59P1-201ENST00000429930 303 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms